Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq619 293 4e-77 seq620 253 3e-65 >seq619 Length=4895 Score = 293 bits (324), Expect = 4e-77 Identities = 234/279 (84%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| ||||||||||||||||| | |||| | ||||||||||||||||||| Sbjct 793 CCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAGAGCCGCCTTCGCCACTGGTGT 734 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| ||||||||||||||||||||||||||| |||||||| | ||||| | |||| Sbjct 733 TCCTCCATATATCTACGCATTTCACCGCTACACATGGAATTCCACTCTCCTCTTCTGCAC 674 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCT-ATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| ||||||| |||| | || ||||||||| | ||||||||| ||| Sbjct 673 TCAAGTCTCCCAGTTTCCAATG-ACCCTCCCCGGTTGAGCCGGGGGCTTTCACATCAGAC 615 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || |||||| | | | |||||| ||||||||||||||| |||||||||||||||| Sbjct 614 TTAAGAAACCGCCTGCGCTCGCTTTACGCCCAATAAATCCGGACAACGCTTGCCACCTAC 555 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||||||||||||||||||||||||||| Sbjct 554 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 516 >seq620 Length=1424 Score = 253 bits (280), Expect = 3e-65 Identities = 216/265 (82%), Gaps = 1/265 (0%) Strand=Plus/Plus Query 14 GCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATC 73 ||| || ||||||| | | |||| | ||||||||||||||||||||||| | |||||| Sbjct 878 GCCACAACGTCAGTAATAGGCCAGTTAGCCGCCTTCGCCACTGGTGTTCCTTCATATATC 937 Query 74 TACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAG 133 |||||||| |||||||||||| | |||||| | ||||||| |||| || || || Sbjct 938 TACGCATTCCACCGCTACACATGAAATTCCACTAACCTCTCCTATACTCTAGTAATGTAG 997 Query 134 TTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCT 193 |||| || || || || |||||||||| || ||| || || ||||||| ||| || Sbjct 998 TTTCCAAGGC-GGTTAGAGGTTGAGCCCCTAAATTTAACCTCAGACTTGCAAAACCGTCT 1056 Query 194 ACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCT 253 || | | |||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1057 ACGCACGCTTTACGCCCAATAAATCCGGATAACGCTTGCCACCTATGTATTACCGCGGCT 1116 Query 254 GCTGGCACGTAGTTAGCCGTGGCTT 278 |||||||| |||||||||||||||| Sbjct 1117 GCTGGCACATAGTTAGCCGTGGCTT 1141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827514685564