Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq619 116 3e-24 seq20498 100 2e-19 seq20497 100 2e-19 >seq619 Length=4895 Score = 116 bits (128), Expect = 3e-24 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||||||||||||||| | | |||||||||||||| | || Sbjct 4276 TAGCTTTTATCCGTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTAAGCCCGA 4217 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | ||||||| |||||| | ||| |||| || |||| | Sbjct 4216 CTTTCGTCCCTGCTCGACTTGTAGGTCTCGCAGTCAAGCTCCCTTCTGCCTTTACACTCT 4157 Query 121 CACTACGATTTCCGACC 137 | ||||||| ||| Sbjct 4156 TCGAATGATTTCCAACC 4140 >seq20498 Length=630 Score = 100 bits (110), Expect = 2e-19 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||| ||||| || || ||||||||||| | || Sbjct 528 TAACTTTTATCCGTTGAGCGACGGCCTTTCCACACAGCACCGCCGGATCACTAAGCCCAA 469 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| ||||||| |||||||| ||||| || |||| || | Sbjct 468 CTTTCGTTCCTGCTCGACTTGTATGTCTCGCAGTCAAGCACCCTTTTACCTTTGCGCTCT 409 Query 121 CACTACGATTTCC 133 || ||||||| Sbjct 408 ACATATGATTTCC 396 >seq20497 Length=631 Score = 100 bits (110), Expect = 2e-19 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||| ||||| || || ||||||||||| | || Sbjct 529 TAACTTTTATCCGTTGAGCGACGGCCTTTCCACACAGCACCGCCGGATCACTAAGCCCAA 470 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| ||||||| |||||||| ||||| || |||| || | Sbjct 469 CTTTCGTTCCTGCTCGACTTGTATGTCTCGCAGTCAAGCACTCTTTTACCTTTGCGCTCT 410 Query 121 CACTACGATTTCC 133 || ||||||| Sbjct 409 ACATATGATTTCC 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351471722800