Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq619 381 9e-104 seq20499 266 5e-69 >seq619 Length=4895 Score = 381 bits (422), Expect = 9e-104 Identities = 249/274 (91%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||||||| ||||||||| |||||| ||||||||||| || ||||| ||||| Sbjct 4611 GAGGTGGGCTTCACACTTAGATGCTTTCAGCGTTTATCCCTTCCCTACATAGCTACCCAG 4552 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||||||| ||||||||| |||||| ||| |||||||||||||||||||||| Sbjct 4551 CAATGCCCTTGGCAGAACAACTGGTACACCAGCGGTAAGTCCATCCCGGTCCTCTCGTAC 4492 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| | Sbjct 4491 TAAGGACAGCTCCTCTCAAATTTCCAACGCCCGCGACGGATAGGGACCGAACTGTCTCAC 4432 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 4431 GACGTTCTGAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 4372 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| ||||||||||||| ||||||||||||||| Sbjct 4371 GACTACAGCCCCAGGATGCGACGAGCCGACATCG 4338 >seq20499 Length=2546 Score = 266 bits (294), Expect = 5e-69 Identities = 209/249 (84%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 10 CTTCGGGCTT-AGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68 ||||| |||| |||||| |||||| ||||| | | | || ||||| ||||||| ||| Sbjct 2298 CTTCGCGCTTTAGATGCTTTCAGCGCTTATTCATGCTCTACATAGCTACCCAGCTGTGCC 2357 Query 69 CTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC 128 |||| |||||||||||||||||||| |||||| ||||||||||||||||| | || Sbjct 2358 ACTGGCGTGACAACTGGTGCACCAGAGGTAGGTCCATTCCGGTCCTCTCGTACTAGGAAC 2417 Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188 |||| |||||||||| | |||||||||| |||||||||| ||||||||| |||||||| Sbjct 2418 AGCTTTCCTCAAATTTCTTGCGCCCACGACAGATAGGGACCAAACTGTCTCACGACGTTC 2477 Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248 |||||||||||||||| || ||||||||||||||||||||||||||||| | | ||| || Sbjct 2478 TGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAGCGACTACA 2537 Query 249 GCCCCAGGA 257 | |||||| Sbjct 2538 CCTCCAGGA 2546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779589124624