Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq619 205 2e-50 seq620 196 1e-47 >seq619 Length=4895 Score = 205 bits (226), Expect = 2e-50 Identities = 308/436 (71%), Gaps = 34/436 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||| | ||||| ||||||||| |||||||| | ||| |||| ||| || ||||| Sbjct 450 TTTACGATCCGAAAACCTTCTTCACTCACGCGGCGTTGCTCGGTCAGACTTTCGTCCATT 391 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | || |||||| ||||||||||||||||||||| ||| |||||||||||| ||| ||| Sbjct 390 GCCGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAATGT 331 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| | ||| |||||||| | |||| | ||||| |||| |||| ||| ||||| | ||| Sbjct 330 GGCCGATCACCCTCTCAGGTCGGCTATGCATCGTGGCCTTGGTGAGCCGTTACCTCACCA 271 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGC-CCGAAGGTCCCCCT----- 238 |||||||||| | |||| ||||| | || ||| ||| | | || | Sbjct 270 ACTAGCTAATGCACCGCGGGTCCATCC----ATCAGCGGCACCGTAAAGCGCCTTTCAAA 215 Query 239 ------CTTTGGTCTTGCGA-CGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCC 291 | || || ||| ||||| |||||||||| | ||||||| |||||||| Sbjct 214 ACGAAACCATGCGGTTTCGATTGTTATACGGTATTAGCACCTGTTTCCAAGTGTTATCCC 155 Query 292 CCTCCATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTC----AGCGAA 346 | || |||| ||| |||| |||||||||||| |||||||| || || Sbjct 154 CTTCTGATGGGCAGGTTACCCACGTGTTACTCACCCGTTCGCCACTCCTCTTTTCCCGGT 95 Query 347 GCAGCAAGCTGCTTCCTGT--------TACCGTTCGACTTGCATGTGTTAGGCCTGCCGC 398 | ||||||| ||| || | |||||||||||||||| |||||| ||||| Sbjct 94 GGAGCAAGC----TCCGGTGGGAAAAGAAGCGTTCGACTTGCATGTATTAGGCACGCCGC 39 Query 399 CAGCGTTCAATCTGAG 414 |||||||| ||||| Sbjct 38 CAGCGTTCGTCCTGAG 23 >seq620 Length=1424 Score = 196 bits (216), Expect = 1e-47 Identities = 158/191 (83%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||||| |||||| ||||| ||| |||||||||| ||| |||||||||| ||||||| Sbjct 1207 CTTTACAATCCGAAGACCTTCATCAGTCACGCGGCATTGCTCCATCAGGCTTTCGCCCAT 1266 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 |||| || ||| || |||||||||| |||||| ||| ||| |||||||||||| ||| || Sbjct 1267 TGTGAAAAATTTCCTACTGCTGCCTTCCGTAGAAGTTTGGGCCGTGTCTCAGTCCCAATG 1326 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||| | ||||||||||||| | |||| | ||||| ||| ||| ||||||||| || Sbjct 1327 TGGCCGTTCATCCTCTCAGATCGGCTACGCATCGTTACCTTGGTAAGCCATTACCTTACC 1386 Query 184 AACTAGCTAAT 194 |||||| |||| Sbjct 1387 AACTAGTTAAT 1397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1220443133184