Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq619 358 2e-96 seq620 307 3e-81 >seq619 Length=4895 Score = 358 bits (396), Expect = 2e-96 Identities = 388/516 (75%), Gaps = 35/516 (7%) Strand=Plus/Plus Query 18 AGAAGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACA 77 ||| ||| |||| ||||||||||||| |||||||||||||||| | | |||||||| Sbjct 104 AGAGGAGTGGCGAACGGGTGAGTAACACGTGGGTAACCTGCCCATCAGAAGGGGATAACA 163 Query 78 TACCGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAG 137 |||| ||||||||| |||| | | | |||||||| | | |||| Sbjct 164 CTTGGAAACAGGTGCTAATACCGTATAACAATCGAA-ACCGCATGGTTTCGTTTTGAAAG 222 Query 138 C-----TCCGG---CGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAAC 189 | ||| || | |||| |||||||| |||||||||||||| ||||||| Sbjct 223 GCGCTTTACGGTGCCGCTGATGGATGGACCCGCGGTGCATTAGCTAGTTGGTGAGGTAAC 282 Query 190 GGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTG 249 |||| |||||||| ||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 283 GGCTCACCAAGGCCACGATGCATAGCCGACCTGAGAGGGTGATCGGCCACATTGGGACTG 342 Query 250 AGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAG 309 |||||||| ||||||||||||||||||||||||| |||||| || |||||| | |||| Sbjct 343 AGACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAG 402 Query 310 CCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCA 369 |||| |||||||||||||||| || ||||| ||||| ||||||| |||||| | | Sbjct 403 TCTGACCGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAACTCTGTTGTTA 462 Query 370 AGGAAGA-------------TAA------------TGACGGTACTTGAGGAGGAAGCCCC 404 ||||| ||| |||||||| | | || ||||| | Sbjct 463 GAGAAGAACAAGGGTGAGAGTAACTGTTCACCCCTTGACGGTATCTAACCAGAAAGCCAC 522 Query 405 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 464 ||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| ||| Sbjct 523 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTA- 581 Query 465 TGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | |||||||||| | ||| ||| ||||||||||||| Sbjct 582 TTGGGCGTAAAGCGAGCGCAGGCGGTTTCTTAAGTC 617 >seq620 Length=1424 Score = 307 bits (340), Expect = 3e-81 Identities = 280/359 (78%), Gaps = 27/359 (8%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 |||| |||||||||||||||| |||||||||||| ||||| |||||||| |||||||| Sbjct 1397 ATTAACTAGTTGGTAAGGTAATGGCTTACCAAGGTAACGATGCGTAGCCGATCTGAGAGG 1338 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||| |||||||||||| |||||||||||| ||||||| |||||| |||||||||| || Sbjct 1337 ATGAACGGCCACATTGGGACTGAGACACGGCCCAAACTTCTACGGAAGGCAGCAGTAGGA 1278 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||| || |||||||||| ||||||||||| ||||| ||||||||| |||||||| |||| Sbjct 1277 AATTTTTCACAATGGGCGAAAGCCTGATGGAGCAATGCCGCGTGACTGATGAAGGTCTTC 1218 Query 348 GGGTCGTAAAGCTCTGTCCTCAAGGAAGA--------------------------TAATG 381 || | |||||| ||||| | | |||||| || | Sbjct 1217 GGATTGTAAAGGTCTGTTGTAAGGGAAGAAGTGCTAGAATAGGAAATGATTTTAGTATCG 1158 Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 || ||| | | || ||||| |||||||||| |||||||||||||||||||||| |||| Sbjct 1157 ACCATACCTTACCAGAAAGCCACGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGG 1098 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| ||||||||||||| ||| | |||||||||| |||||||| ||||| ||||| Sbjct 1097 TGGCAAGCGTTATCCGGATTTA-TTGGGCGTAAAGCGTGCGTAGACGGTTTTGCAAGTC 1040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495202582016