Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq92184 134 3e-29 seq619 125 1e-26 seq92185 123 5e-26 >seq92184 Length=875 Score = 134 bits (148), Expect = 3e-29 Identities = 184/252 (73%), Gaps = 9/252 (4%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||||||||||||||| | || |||||||||||| | | ||||||||||| || Sbjct 156 ATGGTGGATGCCTTGGAATTGGAAGACGATGAAGGACGCGATTACCTGCGATAAGCTTCG 215 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC-GGCCCTTT- 125 ||||| | ||| | |||||||||| |||| ||||||||||||||||| |||| Sbjct 216 GGGAG-CTGGAAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCACTATCTTTA 274 Query 126 ---GGGT--CATTGCATGCTGAATACATAGGTATGCAAAGCGA-ACGCGGCGAACTGAAA 179 | | | || | ||||| ||||| | |||| || || || | ||| ||||| Sbjct 275 ATCAGATAGTACTGTACAATGAATTCATAGTTGTGCAGAGTGATACCTAGAGAATTGAAA 334 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| |||| || ||||||||||| | | | ||||||| ||||| ||||||||||| Sbjct 335 CATCTTAGTACCTAGAGGAAAAGAAAGCGAATGTGATTCCCTTAGTAGCGGCGAGCGAAA 394 Query 240 TGGGATGAGCCT 251 |||| ||||| Sbjct 395 AGGGAGCAGCCT 406 >seq619 Length=4895 Score = 125 bits (138), Expect = 1e-26 Identities = 189/259 (73%), Gaps = 11/259 (4%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59 || || || ||||||||||||||| | || |||||||||||| | || | |||| Sbjct 1836 AGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACTAACAC-CGAT 1894 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| |||||| | | | || |||||| |||||||||||||||| ||||| | Sbjct 1895 ATGCTTTGGGGAGCT-GTACGTAAGCTATGATCCAGAGATTTCCGAATGGGGGAACCCAG 1953 Query 120 CC-CTTTG---GGTCATTGC--ATGC-TGAATACATAG-GTATGCAAAGCGAACGCGGCG 171 | |||| || || | || | ||||||||||| |||| | | | |||| | | Sbjct 1954 CATCTTTTATAGGATGTTACGTATACGTGAATACATAGCGTATACGAGGTAGACGCAGAG 2013 Query 172 AACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGC 231 |||||||||||||||||| ||||||||| ||||| || ||||||| ||||| ||| Sbjct 2014 AACTGAAACATCTAAGTACCTGCAGGAAGAGAAAGAAAATTCGATTCCCTGAGTAGCGGC 2073 Query 232 GAGCGAAATGGGATGAGCC 250 |||||||| |||| |||| Sbjct 2074 GAGCGAAACGGGAAAAGCC 2092 >seq92185 Length=882 Score = 123 bits (136), Expect = 5e-26 Identities = 184/259 (71%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 ||||| |||||| ||||||||| | || |||||||||| | | | ||||||| Sbjct 736 AGTGCGTATGGTGAATGCCTTGGAATTGGAAGACGATGAAGGATGCGATTACCTGCGATA 677 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| | || | | ||||||||| |||| ||||||||||||||||| Sbjct 676 AGCTTCGGGGAGCTGGAAATAAGA-TTTGATCCGGAGATGTCCGAATGGGGAAACCCACT 618 Query 121 CCTTTGGGTCAT-------TGCATGCTGAATACATAGGTATGCAAAGCGA-ACGCGGCGA 172 || ||| || | ||||| ||||| | |||| || || || | || Sbjct 617 ATCTTTAATCAGATAGTACTGTACAATGAATTCATAGTTGTGCAGAGTGATACCTAGAGA 558 Query 173 ACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCG 232 | |||||||||| |||| || ||||||||||| | | | ||||||| ||||| |||| Sbjct 557 ATTGAAACATCTTAGTACCTAGAGGAAAAGAAAGCGAATGCGATTCCCTTAGTAGCGGCG 498 Query 233 AGCGAAATGGGATGAGCCT 251 ||||||| |||| ||||| Sbjct 497 AGCGAAAAGGGAACAGCCT 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 916929788544