Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq11297 143 2e-29
seq95541 125 6e-24
>seq11297
Length=12984
Score = 143 bits (158), Expect = 2e-29
Identities = 886/1415 (63%), Gaps = 48/1415 (3%)
Strand=Plus/Minus
Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521
|| || || || || | ||||||||| |||||||||||||| |||||||| ||||||||
Sbjct 12357 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 12298
Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581
||||| ||||| ||||| | ||| | || || ||||| || | || | || || |
Sbjct 12297 GCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCT 12238
Query 65582 CGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGT 65641
| | |||||| ||| | ||| | | | || | | ||||||||| |
Sbjct 12237 TTAAGGACAGCCCAGTCCCAAA--GGTCTGTAG--GAGTT--TTGTCCCACATATCATAC 12184
Query 65642 TGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701
|| ||| | || || || || || | | || |||| | || || | |
Sbjct 12183 TGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTACTGTACGCACCTTCTTTTTCA 12124
Query 65702 GCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTA 65761
|| | || ||| || | || | ||| || ||||||| || || || || || ||||
Sbjct 12123 GCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTG 12064
Query 65762 AGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGA 65821
|| ||| | || || ||||| | || | ||||| ||||| | || ||||
Sbjct 12063 AGAAGTATTGCTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATG 12004
Query 65822 CCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA 65881
|| ||||| |||||||| || || | ||| | || ||| ||| | | || ||||| |||
Sbjct 12003 CCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACA 11944
Query 65882 GGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGT 65941
|| || |||| | ||| |||| || ||||| | || || | | ||| |
Sbjct 11943 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCT 11884
Query 65942 CGCAATTGTTCGAAATCAAA-ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTT 66000
|||| || |||| ||| |||| || | |||||| |
Sbjct 11883 TTTAATTTTTTAAAATTAAATCTGTT-------AT------------TTTCAACAAACAT 11843
Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060
| ||| || | || || |||||||| || || | || || | || || | ||
Sbjct 11842 GTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCAC 11783
Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120
|| || ||||| ||||| || || || ||||| | ||| | |||||||||||| |
Sbjct 11782 AACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCT 11723
Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180
|| || |||||||| |||| |||||| || || || ||||| ||||||| || || ||
Sbjct 11722 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 11663
Query 66181 GGCGTGCCAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTC 66234
| | ||| | |||| | || ||| || | || ||| |||
Sbjct 11662 TGACTTCCATAACTCTTGAGCTC-TGACTT-GTTTTATAAATCG-------TTTTTCTTC 11612
Query 66235 GTAATGTT---CGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291
| || || | || || | ||| || || || | || | || | |||||
Sbjct 11611 TTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACA 11552
Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351
| || |||||||| || |||| | |||||| |||||| | |||||| |||||
Sbjct 11551 ATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTCATAAACAGATC 11492
Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTT 66410
|||||||| | || || || || || | |||| || || | || ||| || |
Sbjct 11491 TGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCT 11433
Query 66411 TGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACG 66470
| || || | ||| ||||| || || |||||||| || || | || || || || |
Sbjct 11432 TCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAATAAATTGCAAATG 11373
Query 66471 AGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCA 66530
||| ||||||| |||||||| || || || | ||| |||||| | || | ||
Sbjct 11372 CGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCGGTATTGTTATACACTCTCA 11313
Query 66531 ACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCC 66590
|||| || || || || || || ||||| ||||| | ||| || || | || |
Sbjct 11312 ACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTC 11253
Query 66591 GTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGG 66650
|| || || | ||| || ||||| || | || || || ||||| |
Sbjct 11252 TGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTT 11193
Query 66651 CCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAAC 66710
| || || || || |||||| ||| | || || | | ||| | || ||
Sbjct 11192 TTAAAGTATCAAAAATACCTTCAATGCTATCATCTTTCATAGCTATAAGGAAACAGGAGG 11133
Query 66711 TAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT 66770
||| || || |||||||| || ||||| || || || | || || ||||| || |
Sbjct 11132 AAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATT 11073
Query 66771 GGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830
||||| ||| || || | ||| || |||||||| ||| |||||||| || |
Sbjct 11072 TCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATGCCTA 11013
Query 66831 GTGCACA-TCGCATCAGGAGGTATTGAGGCCGTTC 66864
|| | | || ||| || | || |||||||| |||
Sbjct 11012 -TGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 10979
>seq95541
Length=3042
Score = 125 bits (138), Expect = 6e-24
Identities = 173/241 (72%), Gaps = 1/241 (0%)
Strand=Plus/Minus
Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455
|| |||||||| || || || |||| || ||| ||| || || ||||| || |
Sbjct 1667 TTATTCAATGCAATTGAAACTCTACCATGTGTTAAGAAGAAGGCAGACTGGGCGTTACAG 1608
Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515
|||||| ||| | |||||||||||||| ||||| | | || ||||| | ||| |||
Sbjct 1607 TGGATCGGCAGCAAGACGGCTACATTTGGAGAACGTATAATTGCTTTTGCAGCGGTTGAG 1548
Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575
|| |||||||| || ||||| |||| ||||||||||| ||||| || || |||
Sbjct 1547 GGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGTCTGATG 1488
Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635
||||| |||| ||||||||||| | || || | || || || ||| | || |||||
Sbjct 1487 CCCGGATTGACTTTCAGCAATGAACTTATTTCTAGGGATGA-GGTATGTTTAGTAATTTT 1429
Query 61636 G 61636
|
Sbjct 1428 G 1428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396792335389760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |