Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_017732.1 Length=30505 Score E Sequences producing significant alignments: (Bits) Value seq3145 179 7e-41 seq7607 122 2e-23 >seq3145 Length=45091 Score = 179 bits (198), Expect = 7e-41 Identities = 214/287 (75%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 5930 AGGAGGAAGTAGAATGAAACAATTTAACATTGAATTAGTAAGACGTGACAAAGTGAAAGT 5989 ||||||| | ||||||| ||||| | || |||||||||||||||||||| || ||||| Sbjct 4328 AGGAGGAC--AAAATGAAAAAATTTGAAATCGAATTAGTAAGACGTGACAAGGTAAAAGT 4385 Query 5990 AGAACTTGATCCAGAATTTTTTAACGAAGAATGGTTTGCAGAATTTCGGCACTTCTTTTA 6049 ||||||||||||||||| ||| | ||| |||||| | | ||| |||||||| | ||||| Sbjct 4386 AGAACTTGATCCAGAATATTTCACCGAGGAATGGCTAGAAGATTTTCGGCAGTATTTTTA 4445 Query 6050 TGACTATGAAACTTTAGAAGAAATAGCAGAGTATATCACGTTTAACGTTGTGCACAATAA 6109 ||| | | |||||| |||| ||||| | || || ||||| || |||||||| Sbjct 4446 TGATTTTTTCACTTTAAAAGAGTGTGCAGAACACATTGTGTACAACGTAGTACACAATAA 4505 Query 6110 CGAAACTTTCATCGATGGAATTGGAATACCTCTGAGAAATGGAAAACGGCCATATTGGCT 6169 || ||| || || || || | || || || | | |||| ||||| ||||||||| | Sbjct 4506 CGCAACGTTTATTGAGGGTTTCGGTATCCCATTACGTGATGGCAAACGTCCATATTGGAT 4565 Query 6170 -AAAGAAAGACGAAGAAGTAAACGAACACGTAAACGTTATTTATAAC 6215 ||||| | | || |||||||| || || | || ||||| || ||| Sbjct 4566 CAAAGATA-ATGAGGAAGTAAATGAGCATATTAATGTTATCTACAAC 4611 >seq7607 Length=81728 Score = 122 bits (134), Expect = 2e-23 Identities = 293/437 (67%), Gaps = 15/437 (3%) Strand=Plus/Minus Query 6905 TACAAAGAAGGATTTAACGAAAAGATTCGAATTGGTGATTCTCTTGAGTATGCGGGATAT 6964 || |||||||| ||||||||||| || || ||||| ||| | || ||| || | || Sbjct 75088 TATAAAGAAGGTTTTAACGAAAAAGTTACTATCGGTGAGTCTGTCGAATATCAGGAAAAT 75029 Query 6965 AAATATATTATTATTCGCATACTCGAAATaaaaaaaCTGTATTTTAGCAAATCTATAAGA 7024 || |||||| ||||||| || || ||||| |||||| |||||||| | ||||| || Sbjct 75028 AAGTATATTGTTATTCGTATTCTTGAAATCAAAAAAAGATATTTTAGTCAGTCTATTAGT 74969 Query 7025 TTAGAAATCGATGTTTTGGCACAAAAAGTCGGAGAGCCAACTAATTGTAATGAATATAAA 7084 |||| | | ||| ||| ||||||||||||||| | | | | | | |||| ||| Sbjct 74968 TTAGCAGTAAGAGTTCTGGTTCAAAAAGTCGGAGAGATGAGTGAGTATCTTAAATACAAA 74909 Query 7085 AAACAGGCTCAGCTAATCGATCGTTATGATCAAAGCAGAGACACCaaaaaaaTGGTAA-- 7142 || | ||||| | | ||| || ||| | | | ||| || || Sbjct 74908 TCTCAAG---GAATAATC--ACAGAAAGATACAATCAGTCA-AAAGATAAAGTGCCAATC 74855 Query 7143 AAGTC-GGTGATATTATATTTGCTGAAGATAGGAAAATGGCTTATGAAGTTATTTCAATT 7201 ||| | || || ||| || | ||| || || || | |||| | ||||| || Sbjct 74854 AAGGCTGGAGAGATTTCTCTTTATCAAG---GG---ATAGCCTGTGAAATAATTTCCATC 74801 Query 7202 AATGATATTCATTATGAATTTGTTGAGTTGGTTGTTGAATATACAGTTAAAATGATTGCT 7261 ||| ||| ||||||||||||||| || | ||||| ||| |||| | |||||| | Sbjct 74800 AATAGCTTTCGTTATGAATTTGTTGATTTAATCGTTGAGTATTCAGTCCGAGTGATTGTT 74741 Query 7262 CCTTGGAATCAGCATGAGATAAATAAAGCGTTAATAGACGAGCGTAAAAGTACATTTAAG 7321 ||||||| |||| | || || ||| | ||| ||| | || | |||||||| ||||| Sbjct 74740 CCTTGGAGTCAGAAAGAAATTAATGATGCGCTAACGAATGAAAGAAAAAGTACGTTTAAA 74681 Query 7322 GTATTAGAAGGTGGAAA 7338 || || | ||| || || Sbjct 74680 GTTTTGGGAGGAGGGAA 74664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97309063389336