Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq1216 1031 0.0
seq14493 271 2e-68
seq57234 197 4e-46
seq3145 136 1e-27
seq1464 125 2e-24
>seq1216
Length=179962
Score = 1031 bits (1142), Expect = 0.0
Identities = 1023/1315 (78%), Gaps = 28/1315 (2%)
Strand=Plus/Minus
Query 1669 ATGTCAATTATTACTGATGTCTACGCACGTGAAGTCCTTGACTCACGCGGTAACCCAACA 1728
|||||||||||||||||||| ||||| || || | || |||||||||||||||||||||
Sbjct 72271 ATGTCAATTATTACTGATGTTTACGCTCGCGAGATTCTAGACTCACGCGGTAACCCAACA 72212
Query 1729 CTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGGTCGCGGTATGGTTCCTTCAGGA 1788
| ||||||||||| ||||| ||| ||||| ||||| || || ||||||||||||||
Sbjct 72211 ATCGAAGTAGAAGTATACACAGAAAGCGGTGCTTTCGGCCGTGGAATGGTTCCTTCAGGT 72152
Query 1789 GCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGT 1848
|| |||||||||||| |||||||||| ||| | ||||| || |||||| ||||||| ||
Sbjct 72151 GCTTCAACTGGTGAATACGAAGCAGTTGAATTACGTGACGGAGACAAATCTCGTTATGGC 72092
Query 1849 GGTCTTGGT--ACTCAAAAAGCAGTTGATAACGTAAACAACGTTATTGCTGA-GCACATC 1905
||| ||| | ||||| || ||||| |||||||||||| | |||||||| ||| |||
Sbjct 72091 GGTAAAGGTGTAATCAAA--GCTGTTGACAACGTAAACAACATCATTGCTGAAGCA-ATC 72035
Query 1906 ATCGGATTCGACGTACGTGATCAACAAGGTATTGACCGCGCAATGATCGCTCTTGACGGT 1965
|| || | ||| |||||||| ||| | ||| ||| |||||||||||| | |||||
Sbjct 72034 ATTGGCTACGATGTACGTGACCAAATGGCTATCGACAAAGCAATGATCGCTTTAGACGGA 71975
Query 1966 ACTCCAAACAAAGGTAAACTTGGTGCCAACGCTATTCTTGGTGTGTCTATCGCTGTAGCA 2025
||||| |||||||||||| | ||||| ||||||||||||||||| || |||||||| ||
Sbjct 71974 ACTCCTAACAAAGGTAAATTAGGTGCGAACGCTATTCTTGGTGTTTCAATCGCTGTTGCT 71915
Query 2026 CGCGCAGCTGCTGACTACCTTGAAGTTCCACTTTACAGCTACCTTGGCGGATTCAACACT 2085
|| ||||| ||||||||||| ||||| || | ||| |||||| ||||||||||||||
Sbjct 71914 CGTGCAGCAGCTGACTACCTAGAAGTACCTTTATACCACTACCTAGGCGGATTCAACACA 71855
Query 2086 AAAGTTCTTCCAACTCCAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCA 2145
||||| | |||||||||||||||||||||||||||||||| || || | || ||
Sbjct 71854 AAAGTATTACCAACTCCAATGATGAACATCATCAACGGTGGATCACATGCGGATAACTCA 71795
Query 2146 ATCGCTTTCCAAGAATTTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTT 2205
|||| ||||||||||| ||||| | |||| ||| || ||||||||||||||||| ||
Sbjct 71794 ATCGACTTCCAAGAATTCATGATCATGCCTGTTGGCGCGCCAACATTCAAAGAAGCACTA 71735
Query 2206 CGTTGGGGTGCTGAAATCTTCCACGCGCTTAAGAAAATCCTTAAAGAACGTGGACTTGAA 2265
||| |||||| ||| | ||||| || | |||| | ||| |||||| | | |
Sbjct 71734 CGTATGGGTGCGGAAGTATTCCATGCATTAGCTGCAATCTTGAAATCTCGTGGATTAGCA 71675
Query 2266 ACAGCCGTAGGTGACGAAGGTGGTTTCGCACCTCGTTTCGACGGAACTGAAGATGGTGTT 2325
|| | || |||||||||||||| || || ||| | | || ||||| ||| |
Sbjct 71674 ACTTCAGTTGGTGACGAAGGTGGATTTGCTCCTAACCTTGGTTCAAACGAAGAAGGTTTC 71615
Query 2326 GAAACTATCATCAAAGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATC 2385
||| |||||| |||| |||||| ||||| ||||| || ||||||||||| || |
Sbjct 71614 GAAGTAATCATCGAAGCAATCGAAAAAGCTGGCTATGTTCCTGGTAAAGACGTTGTTCTT 71555
Query 2386 GGACTTGACTGTGCATCATCTGAATTCTACGATGCAGAACGTAAA---GTTTACGACTAC 2442
| | | ||| ||| || || ||||||||||| |||| ||| ||||||| |
Sbjct 71554 GCAATGGACGCTGCTTCTTCAGAATTCTACGACAAAGAA---AAAGGTGTTTACGTATTA 71498
Query 2443 ACTAAATTTGAAGGTGAAGGCGCTGCTGTTCGTACTGCTGCAGAACAAATCGACTACCTT 2502
|| | | ||| |||||| | || ||| ||| ||| | | |
Sbjct 71497 GCTGA---TTCAGGCGAAGGC------GAAAAAACAACTGACGAAATGATCAAATTCTAC 71447
Query 2503 GAAGAATTGGTTAACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGAC 2562
|||||||| || ||||||||||||||| |||| |||||||| | ||||||||||||
Sbjct 71446 GAAGAATTAGTATCTAAATACCCAATCATCTCTATTGAAGATGGATTAGACGAAAACGAC 71387
Query 2563 TGGGACGGTT---GGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGT 2619
||||| || | ||||| | || ||| ||| || | ||||||||||| || |||
Sbjct 71386 TGGGATGGATTCAAGAAAT---TGACAGAAGTTCTAGGCGACAAAGTTCAATTAGTGGGT 71330
Query 2620 GACGACTTCTTCGTAACTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCT 2679
|||||||| |||||||| ||||||| | |||| ||||||| | | || ||||
Sbjct 71329 GACGACTTGTTCGTAACAAACACTGAAAAACTTGCTGAAGGTATCGAAAAAGGAATTGCT 71270
Query 2680 AACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATC 2739
||||||||||||||||||||||||||||||||||||||||| |||||||| || || |||
Sbjct 71269 AACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACAGAAACTTTCGAAGCAATC 71210
Query 2740 GAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAA 2799
|||||||| ||||||||||| ||||| |||||||| || || ||||| |||||||| |||
Sbjct 71209 GAAATGGCTAAAGAAGCTGGTTACACTGCAGTAGTTTCTCATCGTTCTGGTGAAACAGAA 71150
Query 2800 GATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCA 2859
|||||||||||| ||||||| ||||||||||| |||||||| ||||| || ||||||||
Sbjct 71149 GATTCAACAATCTCTGATATCGCAGTTGCAACAAACGCTGGCCAAATCAAAACAGGTTCT 71090
Query 2860 TTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTT 2919
| ||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||
Sbjct 71089 CTATCACGTACTGACCGTGTTGCGAAATACAACCAATTATTACGTATCGAAGACCAACTT 71030
Query 2920 GGTGAAGTTGCAGAATACCGTGGTTTGAAATCATTCTACAACTTGAAAAAATAAA 2974
|||||||||||||| ||| ||||||||||| ||||||||||| |||||| |||
Sbjct 71029 GGTGAAGTTGCAGAGTACAAAGGTTTGAAATCTTTCTACAACTT-AAAAAACAAA 70976
>seq14493
Length=87834
Score = 271 bits (300), Expect = 2e-68
Identities = 764/1153 (66%), Gaps = 39/1153 (3%)
Strand=Plus/Plus
Query 44805 CTTCTCCTGTTTGAGTGTTATAGAG---TCTACCAGAGTAGCTTGTGTATTGAGGTGTAA 44861
|||| |||||||| || | |||| || |||| | ||| || |||| ||||| ||
Sbjct 76134 CTTCACCTGTTTGGGTATCGTAGACAGCTCCACCATAATAG---GTATATTTAGGTGAAA 76190
Query 44862 CATATTGACC-TGAGGTTCTAAATGCGACAGTTTGCTTATTATCAGGAGATAGGAGGTCT 44920
| | | ||| | | | || ||||| || ||||||||||| || | || |||
Sbjct 76191 CGAAGTCACCATCACGG----AAAGCGACTAACTGGTTATTATCAGGTGAGAAAAGATCT 76246
Query 44921 TGTCCCATCTGGATATAAGAGCTAGTGTCAACACCAAGAATGTGAAGGAGGGTTGGGAGG 44980
||||| | ||||||||| | | |||||||| | | ||||| | || || |
Sbjct 76247 TGTCCTAATTGGATATAATTTTTTGAATCAACACCTAACAAATGAAGCAATGTCGGTAAA 76306
Query 44981 GCATCAACTTCACCACCAAATGTGTTAGAGATGCCACCTCCAGTATATCCTGGGATGTGA 45040
||||| |||| ||||| | || | | ||| |||||| || | ||| ||||| ||
Sbjct 76307 GCATCGACTTGGCCACCGTACGTATGATTGATTCCACCTTTTGTTTGTCCGGGGATATGG 76366
Query 45041 ATCATGTAAGGGACACGTTGAAGCATGGCTTTATCATAATTTGACCAAGTCTCAGAGTTC 45100
||||| || || || ||||| | | || || ||| |||||| ||| ||| | |
Sbjct 76367 ATCATATATGGCACGCGTTGCATCGCTGCATTGTCAAAATTTGTCCATGTCGAACTTGTT 76426
Query 45101 TTCCCGAGCAGTTCCGCTA--GATTACTGCTTCGCATATCAGAGATACCGTAGTGGTCAC 45158
|| || | | ||| |||| |||| || ||| ||| |||||| |||||||||||||
Sbjct 76427 TTACCAACTAATTCAGCTAAAGATT--TGTTTCTTGTATTAGAGATCCCGTAGTGGTCAC 76484
Query 45159 CATACATAACAATAATCGAATTATCATAAAGGCCAGTTTCCTTAAGGTAATCAAAGAAGT 45218
| || | || || | || || ||||| | |||| || | || | || | ||||| |
Sbjct 76485 CGTATAAGACGATGACTGAGTTTTCATACAAGCCACTTACTTTTAAATAGTTGAAGAATT 76544
Query 45219 CTTTGATTGCAGAGTCAAGATAGTTGGCTGTTGCAAAATACCCGTTAACTGTTTCGTCTT 45278
||| | || | ||| | |||||| ||||| ||||| || || || | |||||| || |
Sbjct 76545 CTTCTACCGCTGTGTCTAAATAGTTAGCTGTCGCAAAGTAACCATTGATTGTTTCATCGT 76604
Query 45279 TTGTGTCAGCGAGTGGGAAACCTTGTTCGTTTTTGTCGCCTG-ACAGGGAAGTGTATGGG 45337
| || | ||| | |||||| || ||| | || | || | ||| || |||
Sbjct 76605 TCGTATTAGCTACTGGGAATCCAGCTTCCTCATT----CGTGAATTTTGAA---TAAGGG 76657
Query 45338 TAGTGGTTAGATACGGTTAGGTATTTAACATAGAAAGGCTGTTGCATTTGTTCCAGATAT 45397
|||| || ||||| | | | |||| ||||| || |||||||| |||| | ||||
Sbjct 76658 AAGTGATTCGATACAGCAATGAATTTTGAGTAGAAGGGTTGTTGCATCCGTTCTAAATAT 76717
Query 45398 TTGATGGAATCTGAAAACATGTACTTATCATTAAGACCGTATTGGAAGGAGTTTTCATCG 45457
| || ||| | | ||| | ||||||| | |||||||||||| ||||| ||||
Sbjct 76718 TGGACGGATTGTTCAAAGAATGGTTTATCATGTAAACCGTATTGGAATGAGTT---ATCG 76774
Query 45458 GTTTTCTCAGTGAAAG-CTGATGAGTCAAAGAAGTAGTTATAACCCCAATGTTTATAGGT 45516
||| | || | || ||| | ||||||||||| | ||| || || ||||| ||
Sbjct 76775 TCATTCAC-GTCATAGTATGAAGCATCAAAGAAGTAATCATACCCAAAACTCTTATAAGT 76833
Query 45517 ATTATTGCGGTTCCAGAAGGATCCAGTGTTTCCGTGGAAAACAGCTGAAGTATAGCCACT 45576
| || ||||||||||| | |||| || || ||||| | || |||||||| |
Sbjct 76834 TTCGTTACGGTTCCAGAATGTACCAGCATTCCCATGGAATGCTGCACTGGTATAGCCTTT 76893
Query 45577 CGTTTGAGCTAGGATAGATGGTGCAGCGTAAGCTGTATTGGTACCACCGTAGTTTACCAT 45636
||||| || ||| |||||| || | ||||| ||||||| |||| |
Sbjct 76894 TGTTTGTTTTAAAATATTTGGTGCTGCTTGGAAAGTATTCTTACCACC-AAGTTGAGTGA 76952
Query 45637 ATA-TGACCCTGTACTTAGTCCGAAGAGTGATGTTTCCATCAAGGTTTCAGCATCAGAAG 45695
||| || ||| | | ||||| | ||| |||||||||| || || |||||| |
Sbjct 76953 ATAGCGATCCTTGGTTCAAACCGAATAATGAATTTTCCATCAATGTCTCTGCATCACTTG 77012
Query 45696 TTTTTCCTGATTTAACTTGGTGGAAGAAGTT-TGAAAAGGCT-AGGGTTTCATTTGAGTG 45753
||||||| | ||| ||||| |||||||| || | |||| || | |||||||| ||
Sbjct 77013 TTTTTCCAGCTTTTACTTGATGGAAGAAATTGTCAAAA--CTAAATGTTTCATTACTATG 77070
Query 45754 GTAAATGGAATTAAGGAATGGTGTTACTTCATAAGACTGACCA---TCTACTTGGAGCTT 45810
| | | ||| | ||| ||||||||||||| ||| || ||| || ||
Sbjct 77071 GAATAAACTATTCAAGAAAGGTGTTACTTCATGTTCTACGCCATTTTCGTCTTTCAGTTT 77130
Query 45811 GTAATCAATAAGAAACTGTTGGAAACTCTCCAAGTGAATAACGATAACGTTTCTTCCTTT 45870
||||| || | ||||||||| || || || || || ||| |||||| || | || |
Sbjct 77131 ATAATCGATCACAAACTGTTGTAAGCTTTCTAAATGGATATAGATAACATTCTTACCCTC 77190
Query 45871 AGCAATTCCGTAG-TACTTAGGATCAGGTGCTGCATAGTGCTCCTTAACATAAGCTTCAA 45929
||| | ||| ||| | | || | | ||| ||||| || || || || |||| | | |
Sbjct 77191 AGCTAATCCATAGAGATCTTGGTTTGGTTGC-GCATAATGTTCTTTGACGTAAGTTGCTA 77249
Query 45930 CCTTTTTCATGTC 45942
| | |||||| ||
Sbjct 77250 CTTCTTTCATATC 77262
>seq57234
Length=9981
Score = 197 bits (218), Expect = 4e-46
Identities = 275/381 (72%), Gaps = 6/381 (2%)
Strand=Plus/Minus
Query 2514 TAACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTG 2573
||| ||||| ||||| || | || ||||||||| ||| ||| || || || || |
Sbjct 5555 TAAAAAATATCCAATTATTTCAATTGAAGATGGTTTGGCTGAAGGTGATTGAGAAGGATT 5496
Query 2574 GAAATCTCTTACT-GAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCG 2632
|||| | ||| | ||| | |||||| | || | |||||||| || || ||||
Sbjct 5495 TAAAT-TATTATTAGAAAAATCAGAAGGTAAATTCCAGGTTGTTGGTGATGATTTATTCG 5437
Query 2633 TAACTAA--CACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCT 2690
| ||||| || ||| || || |||| |||| || ||| |||||| ||| | |
Sbjct 5436 TTACTAATCCAAAAATTA--TTAAAGAAGGAATTGTTAAAAACGTTGCTAATTCAGTATT 5379
Query 2691 TATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAA 2750
|| ||| | || ||||| || || || ||||||||| | || ||||| |||||| |
Sbjct 5378 AATTAAACTAAATCAAATTGGAACATTAACTGAAACTATGGAGGCTATTGAAATGTGTCA 5319
Query 2751 AGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAAT 2810
| ||||||| | |||||||||||||| || ||||| || |||||||||||| |||| ||
Sbjct 5318 AAAAGCTGGGTGAACAGCAGTAGTATCTCATCGTTCTGGGGAAACTGAAGATACAACGAT 5259
Query 2811 CGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTAC 2870
||||| | ||||| || ||| |||| |||||||| ||||||||| ||||| | ||
Sbjct 5258 TGCTGACTTAGCAGTAGCTTTTAATACTGGACAAATTAAAACAGGTTCAATGTCAAGAAC 5199
Query 2871 TGACCGTATTGCTAAATACAA 2891
||| ||| |||| ||||| ||
Sbjct 5198 TGATCGTGTTGCAAAATATAA 5178
>seq3145
Length=45091
Score = 136 bits (150), Expect = 1e-27
Identities = 233/332 (70%), Gaps = 12/332 (4%)
Strand=Plus/Plus
Query 12378 AAGAGGAGAAAAAACATGATTAACAATACAGTTTTAGTTGGAAGATTAACTAAAGACCCA 12437
||||||| ||||| |||||||||||| |||||| ||| | ||||| ||||||||
Sbjct 1781 AAGAGGA--AAAAATATGATTAACAATGTGACTTTAGTAGGACGTTTAACGAAAGACCCT 1838
Query 12438 GAGTTTAAATACAC-AG-GTAGCAACATCGCAGTCGCATCTTTCAGTCTTGCGGTTAACC 12495
|| || || || || | | || | | || || | || | ||||| ||||| |
Sbjct 1839 GATTTGCGCTATACGAGCGGTGGAAAA--GGTGTGGCTACATTTACCCTTGCAGTTAATC 1896
Query 12496 GTAATTTTA---AAGACGCTAACGGAGAGCGTGAAACTGACTTTATTAACTGTGTCATTT 12552
| || |||| | | || ||||||||||||| | ||||| || | ||||| ||||
Sbjct 1897 GAAACTTTACCAATCAAGC---CGGAGAGCGTGAAGCAGACTTCGTTCAATGTGTGATTT 1953
Query 12553 GGCGACAACAGGCTGAAAATTTGGCTAACTGGGCCAAAAAAGGGGCATTGATTGGCATTA 12612
|| | ||| || |||| ||||||| | || | || | ||| | ||| | |
Sbjct 1954 GGAGGAAACCAGCGGAAACACTGGCTAATTATGCTCGCAGGGGAACCTTGCTAGGCGTGA 2013
Query 12613 CTGGACGCATTCAAACACGTAGCTACGAGAATCAGCAAGGTCAACGAGTATATGTGACAG 12672
| ||||| |||||||||||| || || ||||||||||| ||||| || ||||| || |
Sbjct 2014 CCGGACGAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAACGTGTTTATGTAACGG 2073
Query 12673 AAGTTGTCGCTGAAAATTTTCAAATGCTAGAA 12704
||||||| || || ||||||||| || | |||
Sbjct 2074 AAGTTGTAGCAGAGAATTTTCAATTGTTGGAA 2105
>seq1464
Length=66918
Score = 125 bits (138), Expect = 2e-24
Identities = 221/322 (69%), Gaps = 0/322 (0%)
Strand=Plus/Plus
Query 12394 TGATTAACAATACAGTTTTAGTTGGAAGATTAACTAAAGACCCAGAGTTTAAATACACAG 12453
||||||| || || |||||||| | | || ||||| ||||| || ||| |||
Sbjct 17855 TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACAT 17914
Query 12454 GTAGCAACATCGCAGTCGCATCTTTCAGTCTTGCGGTTAACCGTAATTTTAAAGACGCTA 12513
|| || || || ||| | |||| | | || || || ||||| || | | |
Sbjct 17915 CAAGTGGCACTGCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAA 17974
Query 12514 ACGGAGAGCGTGAAACTGACTTTATTAACTGTGTCATTTGGCGACAACAGGCTGAAAATT 12573
|||| | ||||| | || |||||||| ||||| ||||||||| || || ||||
Sbjct 17975 ACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACAC 18034
Query 12574 TGGCTAACTGGGCCAAAAAAGGGGCATTGATTGGCATTACTGGACGCATTCAAACACGTA 12633
| || |||| || | ||||| | | | || | ||||| || |||||||| |||
Sbjct 18035 TAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGTT 18094
Query 12634 GCTACGAGAATCAGCAAGGTCAACGAGTATATGTGACAGAAGTTGTCGCTGAAAATTTTC 12693
|| || ||||| ||||| ||||| || || || |||||||| || |||||||| || |
Sbjct 18095 CTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCC 18154
Query 12694 AAATGCTAGAAAGTCGTGCAGC 12715
|| | | ||||||||||||||
Sbjct 18155 AATTATTGGAAAGTCGTGCAGC 18176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155741771391696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |