Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq3050 212 9e-53
seq3035 212 9e-53
seq2228 212 9e-53
seq3069 210 3e-52
seq3871 206 4e-51
seq3070 206 4e-51
seq3864 190 3e-46
seq3861 123 4e-26
seq2467 109 8e-22
>seq3050
Length=1312
Score = 212 bits (234), Expect = 9e-53
Identities = 186/226 (82%), Gaps = 7/226 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct 1207 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 1150
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | | |||||||| | ||||||| ||||| | | |||||| | ||
Sbjct 1149 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 1090
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| | ||||| || || || | ||| | | |||||||||||||||||||
Sbjct 1089 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 1033
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 1032 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 988
>seq3035
Length=1372
Score = 212 bits (234), Expect = 9e-53
Identities = 186/226 (82%), Gaps = 7/226 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct 1028 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 1085
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | | |||||||| | ||||||| ||||| | | |||||| | ||
Sbjct 1086 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 1145
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| | ||||| || || || | ||| | | |||||||||||||||||||
Sbjct 1146 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 1202
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 1203 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 1247
>seq2228
Length=269593
Score = 212 bits (234), Expect = 9e-53
Identities = 186/226 (82%), Gaps = 7/226 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct 268321 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 268264
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | | |||||||| | ||||||| ||||| | | |||||| | ||
Sbjct 268263 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 268204
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| | ||||| || || || | ||| | | |||||||||||||||||||
Sbjct 268203 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 268147
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 268146 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 268102
>seq3069
Length=1013
Score = 210 bits (232), Expect = 3e-52
Identities = 186/227 (82%), Gaps = 8/227 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct 192 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 249
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT- 119
|||||| | | | |||||||| | ||||||| ||||| | | |||||| | |
Sbjct 250 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 309
Query 120 -ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||||| ||| | ||||| || || || | ||| | | ||||||||||||||||||
Sbjct 310 GACCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGC 366
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
||||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 367 GGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 412
>seq3871
Length=1039
Score = 206 bits (228), Expect = 4e-51
Identities = 185/226 (82%), Gaps = 7/226 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct 894 GTACAAAGGGCAGGGACGTTATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 837
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | | |||||||| | ||||||| ||||| | | |||||| | ||
Sbjct 836 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 777
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| | ||||| || || || | ||| | | |||||||||||||||||||
Sbjct 776 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 720
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 719 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 675
>seq3070
Length=1106
Score = 206 bits (228), Expect = 4e-51
Identities = 185/226 (82%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct 914 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 857
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | | |||||||| | ||||||| ||||| | | |||||| | ||
Sbjct 856 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 797
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| | ||||| || | | | | ||| | | |||||||||||||||||||
Sbjct 796 GCCCGGGCCTCTAGGCCAGGGAGGAACATGC--TGATTCCTTCAGTGTAGCGCGCGTGCG 739
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 738 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 694
>seq3864
Length=1207
Score = 190 bits (210), Expect = 3e-46
Identities = 182/226 (81%), Gaps = 9/226 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |
Sbjct 473 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTCC--GACTC-CGCTTACTAGGAATT-C 418
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | | |||||||| | ||||||| ||||| | | |||||| | ||
Sbjct 417 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 358
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| | ||||| || || || | ||| | | |||||||||||||||||||
Sbjct 357 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 301
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 300 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 256
>seq3861
Length=1043
Score = 123 bits (136), Expect = 4e-26
Identities = 116/144 (81%), Gaps = 3/144 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct 893 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAA-TTC 950
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
|||||| | | | |||||||| | ||||||| ||||| | | |||||| | ||
Sbjct 951 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 1010
Query 120 ACCCGGACCTGTCGGCCAAGGTGA 143
||||| ||| | ||||| || ||
Sbjct 1011 GCCCGGGCCTCTAGGCCAGGGAGA 1034
>seq2467
Length=1061
Score = 109 bits (120), Expect = 8e-22
Identities = 97/118 (82%), Gaps = 5/118 (4%)
Strand=Plus/Minus
Query 109 TTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGT 167
|||||| | || ||||| ||| | ||||| || || || | ||| | | |||||||
Sbjct 1059 TTTCAACGGGTTGCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGT 1003
Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 1002 AGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751968608935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |