Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq2943 170 4e-40
seq3839 168 1e-39
seq3066 168 1e-39
seq3050 161 2e-37
seq3058 152 9e-35
seq3070 147 4e-33
seq3871 138 2e-30
seq3069 98.7 2e-18
>seq2943
Length=1063
Score = 170 bits (188), Expect = 4e-40
Identities = 194/256 (76%), Gaps = 12/256 (5%)
Strand=Plus/Plus
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACAT-- 124
|||||||||||| ||||||||||| ||||||| ||| ||| ||||| |
Sbjct 551 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAATATTTCG 610
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCC 182
| |||||||||||||||||| || | |||||||||||||||||||| || || ||
Sbjct 611 TTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAG 669
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
||||||||||||||||||| ||||| | ||||| || |||||||||||||||
Sbjct 670 GTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTT 729
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
|||| ||||| ||| | |||||||| || |||| | ||||||||| |||||
Sbjct 730 GGATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCATCAATCA-A 788
Query 303 GAACGAAAGTTAGGGG 318
||||||||||||| ||
Sbjct 789 GAACGAAAGTTAGAGG 804
>seq3839
Length=1875
Score = 168 bits (186), Expect = 1e-39
Identities = 193/255 (76%), Gaps = 11/255 (4%)
Strand=Plus/Plus
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACATTA 126
|||||||||||| ||||||||||| ||||||| ||| ||| ||||| |
Sbjct 568 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAATATTTCG 627
Query 127 -GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCG 183
|||||||||||||||||| || | |||||||||||||||||||| || || || |
Sbjct 628 TGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGG 686
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||||| ||||| | ||||| || ||||||||||||||||
Sbjct 687 TAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 746
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
||| ||||| ||| | |||||||| || |||| | ||||||||| ||||| |
Sbjct 747 GATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCATCAATCA-AG 805
Query 304 AACGAAAGTTAGGGG 318
|||||||||||| ||
Sbjct 806 AACGAAAGTTAGAGG 820
>seq3066
Length=1199
Score = 168 bits (186), Expect = 1e-39
Identities = 193/255 (76%), Gaps = 11/255 (4%)
Strand=Plus/Minus
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACATTA 126
|||||||||||| ||||||||||| ||||||| ||| ||| ||||| |
Sbjct 424 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAATATTTCG 365
Query 127 -GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCG 183
|||||||||||||||||| || | |||||||||||||||||||| || || || |
Sbjct 364 TGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGG 306
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||||| ||||| | ||||| || ||||||||||||||||
Sbjct 305 TAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 246
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
||| ||||| ||| | |||||||| || |||| | ||||||||| ||||| |
Sbjct 245 GATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCATCAATCA-AG 187
Query 304 AACGAAAGTTAGGGG 318
|||||||||||| ||
Sbjct 186 AACGAAAGTTAGAGG 172
>seq3050
Length=1312
Score = 161 bits (178), Expect = 2e-37
Identities = 190/250 (76%), Gaps = 14/250 (6%)
Strand=Plus/Plus
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACATTA 126
|||||||||||| ||||||||||| ||||||| ||| ||| ||||| |
Sbjct 282 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAATATTTCG 341
Query 127 -GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCG 183
|||||||||||||||||| || | |||||||||||||||||||| || || || |
Sbjct 342 TGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGG 400
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATT-CAATTGTCAGAGGTGAAATTCTT 242
|||||||||||||||||| ||||| | ||||| | | || |||||||||||||||
Sbjct 401 TAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGA--GTTAGAGGTGAAATTCTT 458
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
|||| ||||| ||| | |||||||| || |||| | ||||||||| |||||
Sbjct 459 GGATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCATCAATCA-A 517
Query 303 GAACGAAAGT 312
||||||||||
Sbjct 518 GAACGAAAGT 527
>seq3058
Length=1092
Score = 152 bits (168), Expect = 9e-35
Identities = 178/237 (75%), Gaps = 10/237 (4%)
Strand=Plus/Plus
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACATTA 126
|||||||||||| ||||||||||| ||||||| ||| ||| ||||| |
Sbjct 851 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAATATTTCG 910
Query 127 -GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCG 183
|||||||||||||||||| || | |||||||||||||||||||| || || || |
Sbjct 911 TGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGG 969
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||||| ||||| | ||||| || ||||||||||||||||
Sbjct 970 TAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 1029
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||| ||||| ||| | |||||||| || |||| | ||||||||| |||||
Sbjct 1030 GATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCATCAATCA 1086
>seq3070
Length=1106
Score = 147 bits (162), Expect = 4e-33
Identities = 151/194 (78%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCGT 184
|||||||||||||||||| || | |||||||||||||||||||| || || || ||
Sbjct 45 GCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGT 103
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||| ||||| | ||||| || |||||||||||||||||
Sbjct 104 AATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGG 163
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|| ||||| ||| | |||||||| || |||| | ||||||||| ||||| ||
Sbjct 164 ATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCATCAATCA-AGA 222
Query 305 ACGAAAGTTAGGGG 318
||||||||||| ||
Sbjct 223 ACGAAAGTTAGAGG 236
>seq3871
Length=1039
Score = 138 bits (152), Expect = 2e-30
Identities = 150/194 (77%), Gaps = 5/194 (3%)
Strand=Plus/Plus
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCGT 184
|||||||||||||||||| || | |||||||||||||||||||| || || || ||
Sbjct 25 GCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGT 83
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||| ||||| | ||||| || |||||||||||||||||
Sbjct 84 AATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGG 143
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|| ||||| ||| | |||||||| || |||| | || |||||| ||||| ||
Sbjct 144 ATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTG-TTTCATCAATCA-AGA 201
Query 305 ACGAAAGTTAGGGG 318
||||||||||| ||
Sbjct 202 ACGAAAGTTAGAGG 215
>seq3069
Length=1013
Score = 98.7 bits (108), Expect = 2e-18
Identities = 104/136 (76%), Gaps = 1/136 (1%)
Strand=Plus/Minus
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
||||||||||||||||||| ||||| | ||||| || |||||||||||||||
Sbjct 1004 GTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTT 945
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
|||| ||||| ||| | |||||||| || |||| | ||||||||| |||||
Sbjct 944 GGATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCATCAATCA-A 886
Query 303 GAACGAAAGTTAGGGG 318
||||||||||||| ||
Sbjct 885 GAACGAAAGTTAGAGG 870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915160564032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |