Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3864 208 1e-51 seq2467 208 1e-51 seq3871 203 5e-50 seq3070 203 5e-50 seq3069 203 5e-50 seq3050 201 2e-49 seq3035 113 7e-23 seq2228 113 7e-23 >seq3864 Length=1207 Score = 208 bits (230), Expect = 1e-51 Identities = 214/282 (76%), Gaps = 37/282 (13%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 323 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 264 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------C 116 | |||| || | |||| |||| | |||||||||||||| | Sbjct 263 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGC 206 Query 117 CAGCCAC-----CAACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 ||| | | ||| | ||| ||| | |||||||||||| || Sbjct 205 CAGTGAGTTGCGCGACCGAAATCGCGCACACCTAAATGACGACGCCTATTTAGCAGGCTA 146 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 145 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 86 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||| | |||||||| Sbjct 85 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 44 >seq2467 Length=1061 Score = 208 bits (230), Expect = 1e-51 Identities = 214/282 (76%), Gaps = 37/282 (13%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1013 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 954 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------C 116 | |||| || | |||| |||| | |||||||||||||| | Sbjct 953 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGC 896 Query 117 CAGCCAC-----CAACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 ||| | | ||| | ||| ||| | |||||||||||| || Sbjct 895 CAGTGAGTTGCGCGACCGAAATCGCGCACACCTAAATGACGACGCCTATTTAGCAGGCTA 836 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 835 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 776 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||| | |||||||| Sbjct 775 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 734 >seq3871 Length=1039 Score = 203 bits (224), Expect = 5e-50 Identities = 211/279 (76%), Gaps = 37/279 (13%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 742 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 683 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------C 116 | |||| || | |||| |||| | |||||||||||||| | Sbjct 682 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGC 625 Query 117 CAGCCAC-----CAACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 ||| | | ||| | ||| ||| | |||||||||||| || Sbjct 624 CAGTGAGTTGCGCGACCGAAATCGCGCACACCTAAATGACGACGCCTATTTAGCAGGCTA 565 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 564 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 505 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 ||||||||||||| |||||||||||||||| | ||||| Sbjct 504 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCT 466 >seq3070 Length=1106 Score = 203 bits (224), Expect = 5e-50 Identities = 214/283 (76%), Gaps = 38/283 (13%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 761 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 702 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------C 116 | |||| || | |||| |||| | |||||||||||||| | Sbjct 701 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGC 644 Query 117 CAGCCAC-----CAACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 ||| | | ||| | ||| ||| | |||||||||||| || Sbjct 643 CAGTGAGTTGCGCGACCGAAATCGCGCACACCTAAATGACGACGCCTATTTAGCAGGCTA 584 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 583 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 524 Query 217 GCACCACCACCCATAGAATCAAGAAAG-AGCTATCAATCTGTC 258 ||||||||||||| |||||||||||| |||| | |||||||| Sbjct 523 GCACCACCACCCACCGAATCAAGAAAGAAGCTGTTAATCTGTC 481 >seq3069 Length=1013 Score = 203 bits (224), Expect = 5e-50 Identities = 214/283 (76%), Gaps = 38/283 (13%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 345 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 404 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------C 116 | |||| || | |||| |||| | |||||||||||||| | Sbjct 405 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGC 462 Query 117 CAGCCAC-----CAACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 ||| | | ||| | ||| ||| | |||||||||||| || Sbjct 463 CAGTGAGTTGCGCGACCGAAATCGCGCACACCTAAATGACGACGCCTATTTAGCAGGCTA 522 Query 157 AGGTCT-CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCA 215 |||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 523 GAGTCTACGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCA 582 Query 216 TGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| |||||||||||||||| | |||||||| Sbjct 583 TGCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 625 >seq3050 Length=1312 Score = 201 bits (222), Expect = 2e-49 Identities = 213/282 (76%), Gaps = 38/282 (13%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1055 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 996 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------C 116 | |||| || | |||| |||| | |||||||||||||| | Sbjct 995 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGC 938 Query 117 CAGCCAC-----CAACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 ||| | | ||| | ||| ||| | |||||||||||| || Sbjct 937 CAGTGAGTTGCGCGACCGAAATCGCGCACACCTAAATGACGACGCCTATTTAGCAGGCTA 878 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| Sbjct 877 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCAC-AACTAAGAACGGCCAT 819 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||| | |||||||| Sbjct 818 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 777 >seq3035 Length=1372 Score = 113 bits (124), Expect = 7e-23 Identities = 89/104 (86%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1180 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 1239 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||| | |||||||||||||| Sbjct 1240 -CTCAATC-TCGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAG 1281 >seq2228 Length=269593 Score = 113 bits (124), Expect = 7e-23 Identities = 89/104 (86%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 268169 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 268110 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||| | |||||||||||||| Sbjct 268109 -CTCAATC-TCGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAG 268068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796766738829