Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq3932 80.6 7e-13 seq3914 80.6 7e-13 seq3888 80.6 7e-13 seq3886 80.6 7e-13 seq3879 80.6 7e-13 seq3102 80.6 7e-13 seq3064 80.6 7e-13 seq3015 80.6 7e-13 >seq3932 Length=1132 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 631 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 573 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 572 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 532 >seq3914 Length=1282 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 493 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 551 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 552 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 592 >seq3888 Length=1183 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 884 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 942 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 943 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 983 >seq3886 Length=1119 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 216 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 158 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 157 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 117 >seq3879 Length=1240 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 866 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 808 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 807 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 767 >seq3102 Length=1067 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 705 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 647 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 646 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 606 >seq3064 Length=1270 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 507 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 449 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 448 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 408 >seq3015 Length=1098 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 363 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 421 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 422 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241546499456