Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq3839 98.7 1e-18
seq3066 98.7 1e-18
seq3058 98.7 1e-18
seq3050 98.7 1e-18
seq2943 98.7 1e-18
seq3871 80.6 3e-13
seq3070 80.6 3e-13
>seq3839
Length=1875
Score = 98.7 bits (108), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 13/185 (7%)
Strand=Plus/Plus
Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65
|||||||||||| ||||||||| | ||||||| ||| ||| |||| |||
Sbjct 568 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAAT--ATTT 625
Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121
| ||||||||||||||||| || | |||||||||||||| ||||| || || |
Sbjct 626 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 684
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
|||||||| |||| ||||| ||||| | ||||| || | ||||||||||||
Sbjct 685 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 744
Query 182 TGGAT 186
|||||
Sbjct 745 TGGAT 749
>seq3066
Length=1199
Score = 98.7 bits (108), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 13/185 (7%)
Strand=Plus/Minus
Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65
|||||||||||| ||||||||| | ||||||| ||| ||| |||| |||
Sbjct 424 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAAT--ATTT 367
Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121
| ||||||||||||||||| || | |||||||||||||| ||||| || || |
Sbjct 366 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 308
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
|||||||| |||| ||||| ||||| | ||||| || | ||||||||||||
Sbjct 307 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 248
Query 182 TGGAT 186
|||||
Sbjct 247 TGGAT 243
>seq3058
Length=1092
Score = 98.7 bits (108), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 13/185 (7%)
Strand=Plus/Plus
Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65
|||||||||||| ||||||||| | ||||||| ||| ||| |||| |||
Sbjct 851 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAAT--ATTT 908
Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121
| ||||||||||||||||| || | |||||||||||||| ||||| || || |
Sbjct 909 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 967
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
|||||||| |||| ||||| ||||| | ||||| || | ||||||||||||
Sbjct 968 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 1027
Query 182 TGGAT 186
|||||
Sbjct 1028 TGGAT 1032
>seq3050
Length=1312
Score = 98.7 bits (108), Expect = 1e-18
Identities = 137/186 (74%), Gaps = 16/186 (9%)
Strand=Plus/Plus
Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65
|||||||||||| ||||||||| | ||||||| ||| ||| |||| |||
Sbjct 282 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAAT--ATTT 339
Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121
| ||||||||||||||||| || | |||||||||||||| ||||| || || |
Sbjct 340 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 398
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATT-CAATTGTCAAAGGTGAAATTC 180
|||||||| |||| ||||| ||||| | ||||| | | || | |||||||||||
Sbjct 399 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGA--GTTAGAGGTGAAATTC 456
Query 181 TTGGAT 186
||||||
Sbjct 457 TTGGAT 462
>seq2943
Length=1063
Score = 98.7 bits (108), Expect = 1e-18
Identities = 134/184 (73%), Gaps = 10/184 (5%)
Strand=Plus/Plus
Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACAT-- 63
|||||||||||| ||||||||| | ||||||| ||| ||| ||||| |
Sbjct 551 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCCGCTTGAATATTTCG 610
Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCCC 122
| ||||||||||||||||| || | |||||||||||||| ||||| || || |
Sbjct 611 TTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAG 669
Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182
|||||||| |||| ||||| ||||| | ||||| || | |||||||||||||
Sbjct 670 GTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTT 729
Query 183 GGAT 186
||||
Sbjct 730 GGAT 733
>seq3871
Length=1039
Score = 80.6 bits (88), Expect = 3e-13
Identities = 92/121 (76%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TA 125
||||||||||||||||| || | |||||||||||||| ||||| || || | | ||
Sbjct 26 CATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGTA 84
Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
||||| |||| ||||| ||||| | ||||| || | ||||||||||||||||
Sbjct 85 ATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGA 144
Query 186 T 186
|
Sbjct 145 T 145
>seq3070
Length=1106
Score = 80.6 bits (88), Expect = 3e-13
Identities = 92/121 (76%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TA 125
||||||||||||||||| || | |||||||||||||| ||||| || || | | ||
Sbjct 46 CATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGTA 104
Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
||||| |||| ||||| ||||| | ||||| || | ||||||||||||||||
Sbjct 105 ATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGA 164
Query 186 T 186
|
Sbjct 165 T 165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511978627360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |