Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq3070 226 5e-57
seq3069 226 5e-57
seq3050 223 7e-56
seq3035 223 7e-56
seq2228 223 7e-56
seq3871 219 8e-55
seq3864 203 6e-50
seq3861 129 1e-27
seq2467 111 3e-22
>seq3070
Length=1106
Score = 226 bits (250), Expect = 5e-57
Identities = 208/258 (81%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | ||||| || | ||||| ||||||||||||||||
Sbjct 660 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 717
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| ||||||||||||||||||||||||| || || | |||| ||
Sbjct 718 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCCTCC 777
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
| ||||| ||| | ||| || | | |||||| ||||||||||||| | | |||
Sbjct 778 C--TGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 835
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| | | | |||||||||| ||||||||||||| ||||| ||| ||||||||||
Sbjct 836 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 895
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 896 ACGTCCCTGCCCTTTGTA 913
>seq3069
Length=1013
Score = 226 bits (250), Expect = 5e-57
Identities = 209/259 (81%), Gaps = 7/259 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | ||||| || | ||||| ||||||||||||||||
Sbjct 446 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 389
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| ||||||||||||||||||||||||| || || | ||||
Sbjct 388 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 332
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTT-AAACTCTGTCGTGCTGGGGATAGAGCATT 249
|| ||||| ||| | |||| | | ||| |||||| ||||||||||||| | | ||
Sbjct 331 CCCTGGCCTAGAGGCCCGGGTCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTT 272
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
|||||||| | | | |||||||||| ||||||||||||| ||||| ||| |||||||||
Sbjct 271 GCAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGAT 212
Query 310 TACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||
Sbjct 211 TACGTCCCTGCCCTTTGTA 193
>seq3050
Length=1312
Score = 223 bits (246), Expect = 7e-56
Identities = 207/258 (80%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | ||||| || | ||||| ||||||||||||||||
Sbjct 954 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 1011
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| ||||||||||||||||||||||||| || || | ||||
Sbjct 1012 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 1068
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| ||||| ||| | ||| || | | |||||| ||||||||||||| | | |||
Sbjct 1069 CCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 1128
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| | | | |||||||||| ||||||||||||| ||||| ||| ||||||||||
Sbjct 1129 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 1188
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 1189 ACGTCCCTGCCCTTTGTA 1206
>seq3035
Length=1372
Score = 223 bits (246), Expect = 7e-56
Identities = 207/258 (80%), Gaps = 6/258 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | ||||| || | ||||| ||||||||||||||||
Sbjct 1281 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 1224
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| ||||||||||||||||||||||||| || || | ||||
Sbjct 1223 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 1167
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| ||||| ||| | ||| || | | |||||| ||||||||||||| | | |||
Sbjct 1166 CCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 1107
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| | | | |||||||||| ||||||||||||| ||||| ||| ||||||||||
Sbjct 1106 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 1047
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 1046 ACGTCCCTGCCCTTTGTA 1029
>seq2228
Length=269593
Score = 223 bits (246), Expect = 7e-56
Identities = 207/258 (80%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | ||||| || | ||||| ||||||||||||||||
Sbjct 268068 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 268125
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| ||||||||||||||||||||||||| || || | ||||
Sbjct 268126 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 268182
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| ||||| ||| | ||| || | | |||||| ||||||||||||| | | |||
Sbjct 268183 CCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 268242
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| | | | |||||||||| ||||||||||||| ||||| ||| ||||||||||
Sbjct 268243 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 268302
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 268303 ACGTCCCTGCCCTTTGTA 268320
>seq3871
Length=1039
Score = 219 bits (242), Expect = 8e-55
Identities = 206/258 (80%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | ||||| || | ||||| ||||||||||||||||
Sbjct 641 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 698
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| ||||||||||||||||||||||||| || || | ||||
Sbjct 699 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 755
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| ||||| ||| | ||| || | | |||||| ||||||||||||| | | |||
Sbjct 756 CCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 815
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| | | | |||||||||| ||||||||||||| ||||| ||| |||||||||
Sbjct 816 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATA 875
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 876 ACGTCCCTGCCCTTTGTA 893
>seq3864
Length=1207
Score = 203 bits (224), Expect = 6e-50
Identities = 204/258 (79%), Gaps = 8/258 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | ||||| || | ||||| ||||||||||||||||
Sbjct 222 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 279
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| ||||||||||||||||||||||||| || || | || ||
Sbjct 280 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGT---TCT 336
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| ||||| ||| | ||| || | | |||||| ||||||||||||| | | |||
Sbjct 337 CCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 396
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| | | | |||||||||| ||||||||||| | ||| ||| ||||||||||
Sbjct 397 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCG-GAGTC-GGAGCTCGCGTTGATT 454
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 455 ACGTCCCTGCCCTTTGTA 472
>seq3861
Length=1043
Score = 129 bits (142), Expect = 1e-27
Identities = 113/141 (80%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247
|| || ||||| ||| | ||| || | | |||||| ||||||||||||| | |
Sbjct 1034 TCTCCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGT 975
Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307
|||||||||| | | | |||||||||| ||||||||||||| ||||| ||| |||||||
Sbjct 974 TTGCAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTG 915
Query 308 ATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||||
Sbjct 914 ATTACGTCCCTGCCCTTTGTA 894
>seq2467
Length=1061
Score = 111 bits (122), Expect = 3e-22
Identities = 87/100 (87%), Gaps = 3/100 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | ||||| || | ||||| ||||||||||||||||
Sbjct 912 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 969
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170
|||||||||||||| |||||||||||||||||||||||||
Sbjct 970 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGA 1009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947159185152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |