Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq3927 486 6e-135
seq3877 486 6e-135
seq3854 486 6e-135
seq3933 484 2e-134
seq3826 484 2e-134
seq3917 480 3e-133
seq3813 471 1e-130
seq3079 464 2e-128
seq3913 360 6e-97
seq3026 284 4e-74
seq3862 257 5e-66
seq2518 210 7e-52
seq2228 205 3e-50
seq2744 165 3e-38
>seq3927
Length=1014
Score = 486 bits (538), Expect = 6e-135
Identities = 322/355 (91%), Gaps = 9/355 (3%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| ||
Sbjct 76 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 132
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| |||||||||||| ||| | |||| | | ||||||||||||||||||||
Sbjct 133 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 192
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 193 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 252
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 253 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 312
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 313 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTT 372
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 373 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 427
>seq3877
Length=1357
Score = 486 bits (538), Expect = 6e-135
Identities = 322/355 (91%), Gaps = 9/355 (3%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| ||
Sbjct 177 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 233
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| |||||||||||| ||| | |||| | | ||||||||||||||||||||
Sbjct 234 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 293
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 294 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 353
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 354 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 413
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 414 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTT 473
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 528
>seq3854
Length=1202
Score = 486 bits (538), Expect = 6e-135
Identities = 322/355 (91%), Gaps = 9/355 (3%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| ||
Sbjct 727 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 671
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| |||||||||||| ||| | |||| | | ||||||||||||||||||||
Sbjct 670 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 611
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 610 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 551
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 491
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 490 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTT 431
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 430 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 376
Score = 118 bits (130), Expect = 3e-24
Identities = 98/120 (82%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| || ||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct 961 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 902
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||||
Sbjct 901 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 842
>seq3933
Length=1287
Score = 484 bits (536), Expect = 2e-134
Identities = 322/356 (90%), Gaps = 10/356 (3%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG--C 237
|| ||||||| |||| || | |||||||| ||||| ||| ||| ||| | |
Sbjct 498 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACCGATC 442
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||||||||| |||||||||||| ||| | |||| | | |||||||||||||||||||
Sbjct 441 TCCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAAC 382
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 381 AGGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 322
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 321 TAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 262
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 261 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCT 202
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 201 TGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 146
Score = 118 bits (130), Expect = 3e-24
Identities = 98/120 (82%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| || ||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct 733 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 674
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||||
Sbjct 673 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 614
>seq3826
Length=1220
Score = 484 bits (536), Expect = 2e-134
Identities = 322/356 (90%), Gaps = 10/356 (3%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG--C 237
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| |
Sbjct 207 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCC 263
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||||||||| |||||||||||| ||| | |||| | | |||||||||||||||||||
Sbjct 264 TCCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAAC 323
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 324 AGGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 383
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 TAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 443
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 444 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCT 503
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 504 TGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 559
Score = 96.9 bits (106), Expect = 1e-17
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
|||||||||||||||||||| ||| |||||||| ||||||||| |||||||||| ||||
Sbjct 12 CCTTAGGACACCTGCGTTATTCTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTG 71
Query 106 ACAATGTCATCAACCCGGATC 126
|| |||| || | |||||||
Sbjct 72 GCAGTGTCCTCGAACCGGATC 92
>seq3917
Length=1010
Score = 480 bits (532), Expect = 3e-133
Identities = 322/356 (90%), Gaps = 10/356 (3%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| ||
Sbjct 200 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 256
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACT-AGAGTCAAGCTCAAC 297
||||||||| |||||||||||| ||| | |||| | | |||| |||||||||||||||
Sbjct 257 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTTAGAGTCAAGCTCAAC 316
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 317 AGGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 376
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 377 TAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 436
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 437 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCT 496
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 497 TGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 552
Score = 95.1 bits (104), Expect = 4e-17
Identities = 71/82 (87%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC-ACCT 104
|||||||||||||||||||| ||| |||||||| ||||||||| |||||||||| ||||
Sbjct 4 CCTTAGGACACCTGCGTTATTCTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGACCT 63
Query 105 GACAATGTCATCAACCCGGATC 126
| || |||| || | |||||||
Sbjct 64 GGCAGTGTCCTCGAACCGGATC 85
>seq3813
Length=1215
Score = 471 bits (522), Expect = 1e-130
Identities = 321/356 (90%), Gaps = 11/356 (3%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| ||
Sbjct 783 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 727
Query 239 CCCACTTATT-CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||||||| | |||||||||||| ||| | |||| | | |||||||||||||||||||
Sbjct 726 CCCACTTACTGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAAC 667
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 666 AGGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 607
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 606 TAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 547
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 546 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCT 487
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 486 TGAATTTC-TCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 432
Score = 118 bits (130), Expect = 3e-24
Identities = 98/120 (82%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| || ||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct 1017 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 958
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||||
Sbjct 957 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 898
>seq3079
Length=1116
Score = 464 bits (514), Expect = 2e-128
Identities = 280/295 (95%), Gaps = 0/295 (0%)
Strand=Plus/Minus
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| |||||||||||| ||| | |||| | | ||||||||||||||||||||
Sbjct 1116 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 1057
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1056 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 997
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 996 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 937
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 936 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTT 877
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 876 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCGCATTGCGTCAACA 822
>seq3913
Length=1098
Score = 360 bits (398), Expect = 6e-97
Identities = 252/284 (89%), Gaps = 10/284 (4%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| ||
Sbjct 818 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 874
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| |||||||||||| ||| | |||| | | ||||||||||||||||||||
Sbjct 875 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 934
Query 299 GGGTCTTCTTTCCCCGC-TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 935 GGGTCTTCTTTCCCCGCCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 994
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 995 TAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 1054
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 1098
Score = 118 bits (130), Expect = 3e-24
Identities = 98/120 (82%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| || ||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct 584 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 643
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||||
Sbjct 644 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 703
>seq3026
Length=1143
Score = 284 bits (314), Expect = 4e-74
Identities = 207/238 (87%), Gaps = 9/238 (4%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| ||
Sbjct 909 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 965
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| |||||||||||| ||| | |||| | | ||||||||||||||||||||
Sbjct 966 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 1025
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1026 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 1085
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 1143
Score = 111 bits (122), Expect = 5e-22
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||||||| || ||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct 676 TTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATTC 735
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| ||||||| ||||||||| |||||||||| |||| || |||| || | |||||||
Sbjct 736 TTTGGCAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 794
>seq3862
Length=1076
Score = 257 bits (284), Expect = 5e-66
Identities = 145/147 (99%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 60
Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 61 TAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTGACATTCAGAGCA 120
Query 507 CTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||
Sbjct 121 CTGGGCAGAAATCACATTGCGTCAACA 147
>seq2518
Length=1131
Score = 210 bits (232), Expect = 7e-52
Identities = 164/194 (85%), Gaps = 9/194 (5%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| ||
Sbjct 779 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 723
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| |||||||||||| ||| | |||| | | ||||||||||||||||||||
Sbjct 722 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 663
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 662 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 603
Query 359 AGTAGATAGGGACA 372
||||||||||||||
Sbjct 602 AGTAGATAGGGACA 589
Score = 118 bits (130), Expect = 3e-24
Identities = 98/120 (82%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| || ||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct 1013 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 954
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||||
Sbjct 953 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 894
>seq2228
Length=269593
Score = 205 bits (226), Expect = 3e-50
Identities = 163/194 (84%), Gaps = 9/194 (5%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238
|| ||||||| |||| || | |||||||| ||||| ||| ||| |||| ||
Sbjct 262002 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 261946
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
||||||||| |||||||||||| ||| | |||| | | ||||||||||||||||||||
Sbjct 261945 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 261886
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 261885 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 261826
Query 359 AGTAGATAGGGACA 372
|||||||||| |||
Sbjct 261825 AGTAGATAGGAACA 261812
Score = 129 bits (142), Expect = 2e-27
Identities = 76/79 (96%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 178792 TAGATAGTAGATAAGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCGCTAATTAG 178851
Query 414 ATGACGAGGCATTTGGCTA 432
|||||||||||||||||||
Sbjct 178852 ATGACGAGGCATTTGGCTA 178870
Score = 113 bits (124), Expect = 1e-22
Identities = 97/120 (81%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| || ||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct 262236 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 262177
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||||||| ||||||||| |||||||||| |||| || |||| || | ||||||
Sbjct 262176 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 262117
>seq2744
Length=1023
Score = 165 bits (182), Expect = 3e-38
Identities = 94/96 (98%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1023 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTGACA 964
Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||
Sbjct 963 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635129539232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |