Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3933 78.8 2e-12 seq3870 78.8 2e-12 seq3046 78.8 2e-12 seq3026 78.8 2e-12 seq3024 78.8 2e-12 seq2228 78.8 2e-12 seq3913 75.2 2e-11 seq2965 75.2 2e-11 >seq3933 Length=1287 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 1057 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 1114 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 1115 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 1169 >seq3870 Length=1002 Score = 78.8 bits (86), Expect = 2e-12 Identities = 87/115 (76%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| ||| || | |||||| ||| | | || | | | || Sbjct 964 GTACGAGAGGAACCGCAAGTTTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 906 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 905 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 851 >seq3046 Length=1085 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 1052 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 995 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 994 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 940 >seq3026 Length=1143 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 349 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 292 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 291 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 237 >seq3024 Length=1014 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 899 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 842 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 841 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 787 >seq2228 Length=269593 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 262560 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 262617 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 262618 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 262672 >seq3913 Length=1098 Score = 75.2 bits (82), Expect = 2e-11 Identities = 87/115 (76%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 260 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 203 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||| ||| ||||||||||||||| | ||| ||| Sbjct 202 GGTGCGAAGCTACCATCCGCGGGATCATGCCTGAACGCCTCTAAGGCCGAAGCCA 148 >seq2965 Length=1130 Score = 75.2 bits (82), Expect = 2e-11 Identities = 87/115 (76%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 || ||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 750 GTTCGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 693 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 692 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819165803776