Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 138 9e-28
seq1351 111 1e-19
>seq3345
Length=207354
Score = 138 bits (152), Expect = 9e-28
Identities = 885/1416 (63%), Gaps = 50/1416 (4%)
Strand=Plus/Minus
Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521
|| || || || || | ||||||||| |||||||||||||| |||||||| ||||||||
Sbjct 112999 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 112940
Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581
||||| ||||| ||||| | ||| | || || ||||| || | || | || || |
Sbjct 112939 GCAGTCGGCATTGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCT 112880
Query 65582 CGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGT 65641
| | |||||| ||| | ||| | | | || | | ||||||||| |
Sbjct 112879 TTGAGGGCAGCCCAGTCCCAAA--GGTCTGTAG--GAGTT--TTGTCCCACATATCATAC 112826
Query 65642 TGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701
|| ||| | || || || || || | | | ||| | || || | |
Sbjct 112825 TGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCA 112766
Query 65702 GCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTA 65761
|| | || ||| || | || | ||| || ||||||| || || || || || ||||
Sbjct 112765 GCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTG 112706
Query 65762 AGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGA 65821
|| ||| | || || ||||| | || | ||||| ||||| | || ||||
Sbjct 112705 AGAAGTATTGCTTTCTCACTTTCGTAAGAAATTCTCATCAACACAAACGCATCTGCCATG 112646
Query 65822 CCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA 65881
|| ||||| |||||||| || || | ||| | || ||| ||| | | || ||||| |||
Sbjct 112645 CCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACA 112586
Query 65882 GGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGT 65941
|| || |||| | ||| |||| || ||||| | || || | | ||| |
Sbjct 112585 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCT 112526
Query 65942 CGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTG 66001
|||| || |||| ||| | || | | | |||||| ||
Sbjct 112525 TTTAATTTTTTAAAATTAAA---TCTATTATTTT---------------CAACAAACATG 112484
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
||| || | || || |||||||| || || | || || | || || | |||
Sbjct 112483 TTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACA 112424
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
| || ||||| ||||| || || || ||||| | ||| | |||||||||||| |
Sbjct 112423 ACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTG 112364
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
|| || |||||||| |||| |||||| || || || ||||| ||||||| || || ||
Sbjct 112363 TTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCTACTTGGGCTTCTATAATT 112304
Query 66182 GCGTGCCAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCG 66235
| | ||| | |||| | || ||| || | || ||| |||
Sbjct 112303 GACTTCCATAACTCTTGAGCTC-TGACTT-GTTTTATAAATCG-------TTTTTCTTCT 112253
Query 66236 TAATGTT---CGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACAC 66292
| || || | || || | ||| || || || | || | || | |||||
Sbjct 112252 TCATATTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACAA 112193
Query 66293 TTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCA 66352
| || |||||||| || |||| | |||||| |||||| | |||||| |||||
Sbjct 112192 TCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTCATAAACAGATCT 112133
Query 66353 GGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC---GTTGCTCCTCAATGCCGTGATTT 66409
|||||||| | ||| || || || || | |||| || |||| | ||||| ||
Sbjct 112132 GGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA--CCCGTG-TTC 112076
Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469
|| || || | ||| ||||| ||||| |||||||| || || | || || || ||
Sbjct 112075 TTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGCTCTAAATAAATCGCAAAT 112016
Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529
| || ||||||| |||||||| || || || | || |||||| | || | |
Sbjct 112015 GCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTC 111956
Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC 66589
||||| || || || || || || ||||| ||||| | ||| || || | ||
Sbjct 111955 AACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCT 111896
Query 66590 CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCG 66649
| || || || | ||| || ||||| || | || || || ||||| |
Sbjct 111895 CTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGT 111836
Query 66650 GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAA 66709
| || || || || |||||| || | || || | | ||| |||| ||
Sbjct 111835 TTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAGGAG 111776
Query 66710 CTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAA 66769
||| || || |||||||| || ||||| || || || | || || ||||| ||
Sbjct 111775 GAAAGCTGCGGCCGCGGTGTGGCTGCTGAGAATAGTGTAGGGCTTGCATGTGTAAAATAT 111716
Query 66770 TGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCG 66829
| ||||| ||| || || | ||| || |||||||| ||| |||||||| ||
Sbjct 111715 TTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATGCCT 111656
Query 66830 AGTGCACA-TCGCATCAGGAGGTATTGAGGCCGTTC 66864
| || | | || ||| || | || |||||||| |||
Sbjct 111655 A-TGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 111621
>seq1351
Length=825266
Score = 111 bits (122), Expect = 1e-19
Identities = 170/241 (71%), Gaps = 1/241 (0%)
Strand=Plus/Minus
Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455
|| |||||||| || || || |||| || ||| ||| || || ||||| || |
Sbjct 601616 TTATTCAATGCAATTGAAACTCTACCATGTGTTAAGAAGAAGGCAGACTGGGCGTTACAG 601557
Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515
|||||| ||| | || ||||||||||| ||||| | | || ||||| | || |||
Sbjct 601556 TGGATCGGCAGCAAGACAGCTACATTTGGAGAACGTATAATTGCTTTTGCAGCAGTTGAG 601497
Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575
|| |||||||| || ||||| |||| ||||||||||| ||||| || || |||
Sbjct 601496 GGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGTCTGATG 601437
Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635
||||| |||| ||||| ||||| | || || | || || || ||| | || |||||
Sbjct 601436 CCCGGATTGACTTTCAGTAATGAACTTATTTCTAGGGATGA-GGTATGTTTCGTAATTTT 601378
Query 61636 G 61636
|
Sbjct 601377 G 601377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397547121343760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |