Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq255881 223 7e-56 seq29733 167 5e-39 seq40447 134 3e-29 seq40448 118 2e-24 seq41844 95.1 2e-17 seq41843 78.8 2e-12 seq41820 78.8 2e-12 >seq255881 Length=344 Score = 223 bits (246), Expect = 7e-56 Identities = 224/298 (75%), Gaps = 26/298 (9%) Strand=Plus/Plus Query 15 GGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTGA 74 |||||||| ||| |||||| ||| |||||||||||||||||||| | || |||| Sbjct 73 GGGTGAAAAAGAACCTGAAACCGTACGCCTACAAGCGGTCGGAGCTCACAAGTTGAGTGA 132 Query 75 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTT 134 |||||||||||||||||||||||||||||||||| || | || || |||| Sbjct 133 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACTCTTTACTGGCAAGGT--------- 183 Query 135 CAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGA 194 | ||||||||| || || ||||| | |||| || | |||| Sbjct 184 -----------------GCGAAAGCGAGTCTGAATAGGGCTATTAGTTAGTAGGATTAGA 226 Query 195 CGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGA 254 ||||||||||||||||||||||| | ||||||||||| |||||| | ||||||| Sbjct 227 CGCGAAACCTTGTGATCTACCCATGGGCAGGTTGAAGCTTTGGTAACACAAAGTGGAGGA 286 Query 255 CCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCA 312 |||||||||| |||||||||||| |||||||||| | ||||||||||||||||||| Sbjct 287 CCGAACCGGTTGACGTTGAAAAGTCTTCGGATGACCTGTGGGTAGGGGTGAAAGGCCA 344 >seq29733 Length=2375 Score = 167 bits (184), Expect = 5e-39 Identities = 250/350 (71%), Gaps = 25/350 (7%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| |||||||||| | ||| ||||| Sbjct 1139 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGCGCCTACAATCCGTCAGAGCC 1197 Query 61 GA---------GTGAT--TCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAG 109 ||| | | ||||| ||||||||||||| | ||||||||| |||||||| Sbjct 1198 TGTGCACCCTTGTGGTGGTGGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAG 1257 Query 110 TCGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAAC 169 | || |||||||||| | | || | |||||| || ||||||||| || ||| Sbjct 1258 TGGTACGTGGCGAGGTTAA-CCCGTGTGG---GGTAGCCGTAGCGAAAGCGAGTCTGAAC 1313 Query 170 AGGGCGACGAGTT-GGTGGCG----CTAGACGCGAAACCTTGTGATCTACCCACGAGCAG 224 |||||| ||| |||||| |||||| |||| | |||||||||||| | ||| Sbjct 1314 AGGGCG----GTTCAGTGGCGTGTTCTAGACCCGAAGCGGAGTGATCTACCCATGGCCAG 1369 Query 225 GTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGG 284 | ||||| |||||| || |||||| ||||||| |||||||| || Sbjct 1370 GGTGAAGCGTCGGTAAGACGACGTGGAGGCCCGAACCCACTTCAGTTGAAAATGGAGGGG 1429 Query 285 ATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||| | ||||||||||||||||||||||||||| | |||||| || Sbjct 1430 ATGAGCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCCGTGATAGCTGGT 1479 >seq40447 Length=4142 Score = 134 bits (148), Expect = 3e-29 Identities = 226/331 (68%), Gaps = 31/331 (9%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| || |||||| | | |||||||||| || |||| Sbjct 2680 CCCGATGAGGGGAGTGAAACAGTACCTGAAACGGATTGCCTACAAGCAGTTGGAGGGCTT 2621 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || |||| |||| ||| |||||||||| | || || ||| | || | ||| || Sbjct 2620 TTATGGCCTGACAGCGTACCTCTTGCATAATGGGTCTGTGACTTAAT-GTATCAAGCAAG 2562 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || || ||||| Sbjct 2561 CTTAAGCCGAT-AGGTG---TAGGCGCAGCGAAAGCGAGTCTGAATAGGGC--------- 2515 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 ||| | |||||| || || |||| ||||| || ||||| Sbjct 2514 -----------------ACCCGGCGATCTAGGCATGACCAGGATGAAGGTGCAGTAACAT 2472 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||| |||||||| | |||||||||||||| ||||||||| | |||||||||| Sbjct 2471 GCACTGGAGGTCCGAACCGATTAACGTTGAAAAGTTACCGGATGACTTGTGGGTAGGGGT 2412 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||| ||||||||||| || Sbjct 2411 GAAAGGCCAATCAAACCGGGAAATAGCTGGT 2381 >seq40448 Length=2356 Score = 118 bits (130), Expect = 2e-24 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 155 AAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTAC 214 |||||||| || || |||||| ||||| ||| |||| ||||||| |||||||| Sbjct 1319 AAAGCGAGTCTGAATAGGGCGTTTAGTTGCTGGTAGAAGACCCGAAACCGAGTGATCTAG 1260 Query 215 CCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAA 274 ||| | |||| ||||| |||||||| || |||||| ||||||| |||||| Sbjct 1259 CCATGGCCAGGCTGAAGGTGCGGTAACACGCACTGGAGGGCCGAACCCACGCCTGTTGAA 1200 Query 275 AAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 || | |||||| | || |||||||||||||||||||||||| ||| |||||| || Sbjct 1199 AAAGTCGGGGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAGATAGCTGGT 1140 Score = 82.4 bits (90), Expect = 1e-13 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| ||| || ||||||| ||||||||| | Sbjct 1434 CCCGACGAGGGGAGTGAAAGAGACC-TGAAACCGGATGCTTACAAGCAGTCGGAGCCCAT 1376 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATG 95 || || ||||||||||| ||||||| |||||| Sbjct 1375 TG-TTGGGTGACGGCGTACCTTTTGTATAATG 1345 >seq41844 Length=219 Score = 95.1 bits (104), Expect = 2e-17 Identities = 128/173 (74%), Gaps = 9/173 (5%) Strand=Plus/Plus Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGTTGGTGGCGCTAGACGCGAAACC 203 ||||| || ||||||||| | || |||||||| |||| | | | |||| |||| | Sbjct 51 AGCCGTAGCGAAAGCGAGTCCGAATAGGGCGACTGAGTGGCGCGATCAAGACCCGAAGCG 110 Query 204 TTGTGATCTACCCACGAGCAGGTTGAAGTCGC-GGTAA---CGCGTGATGGAGGACCGAA 259 |||||||| ||| | ||||||||||| ||| ||||| |||| |||||||||||| Sbjct 111 AAGTGATCTATCCATGGGCAGGTTGAAG-CGCGGGTAAGACCGCG---TGGAGGACCGAA 166 Query 260 CCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCA 312 || | |||||||| | |||||| | ||||||||||||||||||| Sbjct 167 CCCACCAGGGTTGAAAACCTGGGGGATGAGCTGTGGGTAGGGGTGAAAGGCCA 219 >seq41843 Length=212 Score = 78.8 bits (86), Expect = 2e-12 Identities = 122/171 (71%), Gaps = 5/171 (3%) Strand=Plus/Plus Query 92 AATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAA 151 ||||||||| |||||||| || |||||||||| | | ||| | |||||| | Sbjct 6 AATGAGCCTGCGAGTTAGCGGTATGTGGCGAGGTTAACC-CGTGAGG---GGTAGCCGTA 61 Query 152 GTGAAAGCGAGCCTTAACAGGGCGAC-GAGTTGGTGGCGCTAGACGCGAAACCTTGTGAT 210 | ||||||||| || || ||| |||| | || |||||| |||| | ||||| Sbjct 62 GCGAAAGCGAGTTCGAATAGAGCGTTTGAGTCGCATGCCCTAGACCCGAAGCGAAGTGAT 121 Query 211 CTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACC 261 ||| ||| | |||||||||| |||||| ||| |||||||||||||| Sbjct 122 CTATCCATGGCCAGGTTGAAGCGACGGTAAGACGTCGTGGAGGACCGAACC 172 >seq41820 Length=210 Score = 78.8 bits (86), Expect = 2e-12 Identities = 121/171 (71%), Gaps = 5/171 (3%) Strand=Plus/Plus Query 92 AATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAA 151 ||||||||| ||||||||| | |||||||||| | || | ||||| | Sbjct 4 AATGAGCCTGCGAGTTAGTGATATGTGGCGAGGTTAACCCGTGTGGGGC----AGCCGTA 59 Query 152 GTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCGCTAGACGCGAAACCTTGTGAT 210 | ||||||||| || || ||||||| ||| | | |||||| |||| | ||||| Sbjct 60 GCGAAAGCGAGTCTGAATAGGGCGATTCAGTCGCATGTCCTAGACCCGAAGCGAAGTGAT 119 Query 211 CTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACC 261 ||| ||| | |||||||||| |||||| ||| |||||||||||||| Sbjct 120 CTATCCATGGCCAGGTTGAAGCGACGGTAAGACGTCGTGGAGGACCGAACC 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 970104536576