Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq172168 248 1e-63 seq147260 217 2e-54 seq82506 212 9e-53 seq123 212 9e-53 seq17638 196 7e-48 >seq172168 Length=312 Score = 248 bits (274), Expect = 1e-63 Identities = 191/223 (86%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 7 AGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTT 66 |||||||||||||| ||||||| |||| ||||||| |||||||||||||||| ||||||| Sbjct 312 AGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-CCTCGTT 255 Query 67 GAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGG 125 ||| || | |||||||| | ||||||||| |||||| | ||| | |||||||||| Sbjct 254 CAAGTCCGAAAATTGCAACGGACTATCCCCAGCACGATACAGTTTAACAAGATTACCCAC 195 Query 126 ACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAG 185 ||| ||||| |||| ||||||||| || | |||||||||||||||||||||||||| Sbjct 194 GCCTCTCGGCGAAGGATATAGACTCGCTGGCTGTATCAGTGTAGCGCGCGTGCGGCCCAG 135 Query 186 AACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 134 AACGTCTAAGGGCATCACAGACCTGTTATTGCCTCGAACTTCC 92 >seq147260 Length=267 Score = 217 bits (240), Expect = 2e-54 Identities = 152/172 (88%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 58 TTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAG 116 |||||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||| Sbjct 2 TTCCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAG 61 Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 ||||||| ||||| ||||||||||||| |||||||| | |||||||||||||||| Sbjct 62 ATTACCCAGACCTTCCGGCCAAGGTGATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGT 121 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 122 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 173 >seq82506 Length=2398 Score = 212 bits (234), Expect = 9e-53 Identities = 173/206 (84%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| | Sbjct 1677 GTACAAAGGGCAGGGACGTAGTCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1734 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||| | || ||||||| ||||| || ||||| ||| || Sbjct 1735 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATCCCCAGCACGACAAAGTTTCACAAGTTT 1794 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | | |||| ||||| | |||||||| | |||||||||||||||||| Sbjct 1795 ACCCAGTCATTTCGGACAAGGGGCCCCACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCA 1854 Query 180 GCCCAGAACATCTAAGGGCATCACAG 205 |||| ||||||||||||||||||||| Sbjct 1855 GCCCGGAACATCTAAGGGCATCACAG 1880 >seq123 Length=7390 Score = 212 bits (234), Expect = 9e-53 Identities = 186/226 (82%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | Sbjct 4641 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 4698 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | | |||||||| | ||||||| ||||| | | |||||| | || Sbjct 4699 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 4758 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| | ||||| || || || | ||| | | ||||||||||||||||||| Sbjct 4759 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 4815 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 4816 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 4860 >seq17638 Length=4506 Score = 196 bits (216), Expect = 7e-48 Identities = 167/201 (83%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 6 AAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGT 65 ||||||||||||||| ||||||| ||| |||||| ||||||| ||| ||| |||||| Sbjct 2146 AAGGGCAGGGACGTATTCAACGCATGCT-GATGACATACGCTTACAAGGTATT-CCTCGT 2089 Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG 124 |||||| ||| |||| ||||| |||||||||||||||| | ||||| |||||||||| Sbjct 2088 TGAAGAGCAATAATTACAATGCTCTATCCCCATCACGACCGAGTTTCACAAGATTACCCA 2029 Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 ||| |||| |||| || ||||| || || |||||||||||||||||||||||| Sbjct 2028 ATCCTTTCGGATAAGGA-ATGAACTCGCTGGATCGGTCAGTGTAGCGCGCGTGCGGCCCA 1970 Query 185 GAACATCTAAGGGCATCACAG 205 ||||||||||||||||||||| Sbjct 1969 GAACATCTAAGGGCATCACAG 1949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749981450345