Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq17638 87.8 1e-15 seq3178 73.4 2e-11 >seq17638 Length=4506 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 28 GGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTT 87 ||||| || | ||||| || | ||| | | || ||||| |||||||||||||||| ||| Sbjct 500 GGTGCTGAACAAGTCATAA--AAAACCTTGTCCAATCCCCAGTCGGCATAGTTTACTGTT 443 Query 88 AAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||||||| || || Sbjct 442 AAGACTACAACGGTATCTGATCGTTTTTGA 413 >seq3178 Length=420 Score = 73.4 bits (80), Expect = 2e-11 Identities = 46/50 (92%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 68 AGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 1 AGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 50 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277676813370