Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq224339 260 2e-67 seq121782 215 7e-54 seq54618 154 2e-35 seq224338 140 4e-31 seq40447 140 4e-31 seq215055 116 5e-24 seq242598 114 2e-23 seq40448 89.7 7e-16 seq216069 82.4 1e-13 >seq224339 Length=700 Score = 260 bits (288), Expect = 2e-67 Identities = 212/253 (84%), Gaps = 8/253 (3%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | |||||||| Sbjct 403 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTCGCAC 461 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 |||||||||||||||||||||||||||||||| || |||||||| || || | ||||| Sbjct 462 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCACTGGTCTCTGCGGCCTTCAAC-GCTCA 520 Query 121 ACACGT-----CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTG 175 || || |||| | ||| ||||||||||||||||||||||| ||||||| Sbjct 521 CGGAGTGAATCCGGTCACGTG-TCCGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTG 579 Query 176 CCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTG 235 |||| |||||||||||| ||| | ||| |||||| |||||||||||||||||||||||| Sbjct 580 CCGAGTTCCTTAACCACGATTCTCTCGATCGCCTTGGTATTCTCTACCTGACCACCTGTG 639 Query 236 TCGGTTTACGGTA 248 ||||||| |||| Sbjct 640 TCGGTTTGGGGTA 652 >seq121782 Length=912 Score = 215 bits (238), Expect = 7e-54 Identities = 152/168 (90%), Gaps = 7/168 (4%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||||| | |||||||| Sbjct 747 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTAC-GACTTCGCAC 805 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 806 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCACCACCAGCTCA 865 Query 121 -AC---AC-GTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTAC 163 || || |||| ||||||||| |||| ||||||||||||||||||| Sbjct 866 GACCGTACAGTCG-TCACCAGCAATGGCCCCCCTTCTCCCGAAGTTAC 912 >seq54618 Length=301 Score = 154 bits (170), Expect = 2e-35 Identities = 185/248 (75%), Gaps = 10/248 (4%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| ||| ||||| | ||||||| Sbjct 55 CTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTACAGACTTCGCAG 114 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||| ||||||||||| ||| || ||| ||| || ||| | Sbjct 115 AGCCCTGTGTTTTAGATAAACAGTCGCCACCCCCTGGTCTGTGC-----CCCTCAGTCCT 169 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 || | ||| | | | ||| | |||| |||||||||||||| | || ||||||| Sbjct 170 ACTTG-CGTAAAACTGA---GGC-CTCCTTATCCCGAAGTTACGGAGGCAAATTGCCGAG 224 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||| | || ||||| | | | |||||| |||| ||||||| | |||||||||||||| Sbjct 225 TTCCTTCAGCATAGTTCTCTCAAGCGCCTTGGTATACTCTACCAGTCCACCTGTGTCGGT 284 Query 241 TTACGGTA 248 || |||| Sbjct 285 TTCGGGTA 292 >seq224338 Length=298 Score = 140 bits (154), Expect = 4e-31 Identities = 135/170 (79%), Gaps = 5/170 (3%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||| ||||| ||| ||| | | ||| ||| Sbjct 130 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCATATACGTCGTCTTGC-GACTTAGCAT 188 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACC--ACCA--CCAG 116 |||||||||||||||||||||||||||||| | || ||||||||||| |||| | || Sbjct 189 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGACCAAACCACGCTAG 248 Query 117 CTCAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGG 166 | | | | ||||| | || |||||||||||||||||||||| Sbjct 249 CCCGCAAGGGGCTTCACGCGACTCGGTCCCCCTTCTCCCGAAGTTACGGG 298 >seq40447 Length=4142 Score = 140 bits (154), Expect = 4e-31 Identities = 184/251 (73%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTA---CCGTCTTCG 57 |||| ||||| ||||||||||||||||| || ||||| ||| ||| ||| ||| | Sbjct 1451 CTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGACTTAG 1510 Query 58 CACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGC 117 || | ||||||||||| |||||||||||| ||| || || ||| || | | || Sbjct 1511 CAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGCCCCCTCAAAGTGC 1570 Query 118 TCAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 | | | | || || ||| | |||||| |||||| ||||| | || |||||| Sbjct 1571 TTG-CGCATAGTG-------AG-GGC-CTCCTTCTTCCGAAGGTACGGAGGCAATTTGCC 1620 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237 || |||||| | ||| ||| | | | |||||| |||| ||||||||||||||||||||| Sbjct 1621 GAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCTACCTGACCACCTGTGTC 1680 Query 238 GGTTTACGGTA 248 ||||| |||| Sbjct 1681 GGTTTCGGGTA 1691 >seq215055 Length=728 Score = 116 bits (128), Expect = 5e-24 Identities = 129/167 (77%), Gaps = 5/167 (3%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| || |||||| | ||||| |||||||| Sbjct 563 CTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTACAA-CTTCGCAC 621 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTC- 119 ||||||||||||||||||||||||||||| || |||||||| ||| || | || Sbjct 622 GGACCTGTGTTTTTAGTAAACAGTCGCTTGGGCCTGGTCTCTGCGGCCATCATCGCTTCG 681 Query 120 AACACGTCGT-TCACCAGCAGT--GGCACCCCTTCTCCCGAAGTTAC 163 ||| | || | || | | ||| ||||||||||||||||||| Sbjct 682 CACAGCTTGTGTGCTCACGAATCCGGCCCCCCTTCTCCCGAAGTTAC 728 >seq242598 Length=676 Score = 114 bits (126), Expect = 2e-23 Identities = 166/235 (71%), Gaps = 21/235 (9%) Strand=Plus/Plus Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67 ||||| ||||||||||| ||||| || |||||| | ||| | | || ||| | |||| Sbjct 1 TTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTTCGAT-TTAGCAGAGTCCTG 59 Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTC 127 ||||||| ||||||||||| | || ||| ||||| ||| || ||| Sbjct 60 TGTTTTTGATAAACAGTCGCCTGGGCCTCTTCACTGCGGCCAACATT-GCT--------- 109 Query 128 GTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTA 187 ||| ||| | ||||| ||||||||||| | | |||||||| | ||||||| Sbjct 110 GTT----------GGCGTCTCTTCTTCCGAAGTTACGAGACTATTTTGCCTAGTTCCTTA 159 Query 188 ACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 |||| |||| ||| | |||||| ||||||| | ||| |||||||||||||| Sbjct 160 GCCACGACTCACTCGAGCACCTTAGGATTCTCTCCTCGACTACCTGTGTCGGTTT 214 >seq40448 Length=2356 Score = 89.7 bits (98), Expect = 7e-16 Identities = 139/198 (70%), Gaps = 13/198 (7%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| || ||||| || || | | |||||| Sbjct 274 CTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCATCTCTCGAT-TTCGCAG 332 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| ||| || | Sbjct 333 AGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTGCCAC-----------CC 381 Query 121 ACACGTCGTTCACCAGCAGTGGCAC-CCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 ||| | ||| ||| ||| | | ||| ||||||||||||| | || |||||| | Sbjct 382 ACATATGGTTGCCCACATATGGGTCTCGCTTATCCCGAAGTTACGCGAGCAATTTGCCTA 441 Query 180 ATTCCTTAACCACAGTTC 197 |||||| | || |||| Sbjct 442 GTTCCTTCAGCATCGTTC 459 >seq216069 Length=282 Score = 82.4 bits (90), Expect = 1e-13 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 ||||| |||||| |||||||||||| | || |||||||| |||||| | | |||| | Sbjct 214 GGCACACCTTCTTCCGAAGTTACGGTGTCAATTTGCCGAGTTCCTTCATGATTGTTCTCT 155 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | |||||||| || ||| | | |||| |||||||||| ||||| Sbjct 154 CAAGCGCCTTAGAATACTCATCTCGCGCACCAGTGTCGGTTTGCGGTA 107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692536062659