Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq242598 111 2e-22 seq224339 93.3 4e-17 seq54618 89.7 5e-16 seq40447 86.0 7e-15 seq216069 75.2 1e-11 >seq242598 Length=676 Score = 111 bits (122), Expect = 2e-22 Identities = 130/172 (76%), Gaps = 3/172 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| ||||||| | || || |||||| ||| |||||| || || ||||| Sbjct 214 AAACCGACACAGGTAGTCGAGGAGAGAATCCTAAGGTGCTCGAGTGAGTCGTGGCTAAGG 155 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 ||||||||||| | | |||||||| ||| ||| | | | | ||| ||| | || Sbjct 154 AACTAGGCAAAATAGTCTCGTAACTTC-GGAAGAAGAGACGCCA-ACAGCAAT-GTTGGC 98 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| ||| ||| |||||| |||||||| |||||||||||| || ||| || Sbjct 97 CGCAGTGAAGAGGCCCAGGCGACTGTTTATCAAAAACACAGGACTCTGCTAA 46 >seq224339 Length=700 Score = 93.3 bits (102), Expect = 4e-17 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || |||| |||||| | ||| ||||| ||||||| Sbjct 647 CAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGATCGAGAGAATCGTGGTTAAG 588 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||| |||||| || ||| |||||||||||| || ||| Sbjct 587 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 549 >seq54618 Length=301 Score = 89.7 bits (98), Expect = 5e-16 Identities = 129/180 (72%), Gaps = 9/180 (5%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || ||||| |||||||||||| ||| | | | |||| Sbjct 286 AAACCGACACAGGTGGACTGGTAGAGTATACCAAGGCGCTTGAGAGAACTATGCTGAAGG 227 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCC------CTACCCAGAAATG 138 |||| ||||| || | | ||||||||||||||| | | || ||| || | | Sbjct 226 AACTCGGCAATTTGCCTCCGTAACTTCGGGATAAGGAGGCCTCAGTTTTACGCAAGTAGG 167 Query 139 --GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| ||| ||| ||| ||| |||||||| | ||||||||||||| ||| || Sbjct 166 ACTGAGGG-GCACAGACCAGGGGGTGGCGACTGTTTATCTAAAACACAGGGCTCTGCGAA 108 >seq40447 Length=4142 Score = 86.0 bits (94), Expect = 7e-15 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || ||| ||| || ||||| |||||||||||| ||| | |||| Sbjct 1685 AAACCGACACAGGTGGTCAGGTAGAGTATACCAAGGCGCTTGAGAGAAGTGTCCTGAAGG 1626 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCT-AC------CCAGAAAT 137 |||| |||||| || | | ||| |||||| | || | | |||| || | || | | Sbjct 1625 AACTCGGCAAATTGCCTCCGTACCTTCGGAAGAAGGAGGCCCTCACTATGCGCAAGCACT 1566 Query 138 GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| ||| || ||| || |||||||| ||||||||||||||| ||| || Sbjct 1565 TTGAGGGGGCACAGGCCAGGGGGTAGCGACTGTTTAGCAAAAACACAGGGCTCTGCTAA 1507 >seq216069 Length=282 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/108 (76%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| ||||| || || | ||| ||| |||||||||||||| ||| | | | Sbjct 110 CGCAAACCGACACTGGTGCGCGAGATGAGTATTCTAAGGCGCTTGAGAGAACAATCATGA 169 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT-CCCTA 128 ||||||| |||||| |||| | |||||||||| | || | || ||||| Sbjct 170 AGGAACTCGGCAAATTGACACCGTAACTTCGGAAGAAGGTGTGCCCTA 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529774130882