Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq224339 316 5e-84 seq40448 302 1e-79 seq40447 295 2e-77 seq121782 230 6e-58 seq224338 214 5e-53 seq54618 161 2e-37 seq215055 147 5e-33 seq200237 125 2e-26 seq216068 91.5 4e-16 seq242598 89.7 1e-15 seq216069 75.2 3e-11 >seq224339 Length=700 Score = 316 bits (350), Expect = 5e-84 Identities = 326/417 (78%), Gaps = 7/417 (2%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGCGCCGCCATCGT 71 ||||||| || | | ||||||| | |||| ||| ||| |||||||| | |||| Sbjct 222 GCATCTTTACTCGTAGTGCAATTTCGCCGAGT-TCGCGGTTGAGACAGCTGGGAAGTCGT 280 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 281 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTT 340 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT 191 || ||||| ||||||||||| ||||||| || ||||||||| | ||||||| Sbjct 341 ATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCAGAGCTTCGTCGAAACTAACCCTTC 400 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 | |||||||||| ||||||||||||||||| || ||||| || ||| || || ||| Sbjct 401 CTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTCGCA 460 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTT 311 | ||||||||||| ||||||||||| | ||||| ||| || || || ||| Sbjct 461 CGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCACTGGTCTCTGCGGCCTTCA-ACGCTC 519 Query 312 ACGGAGCAAGTCC-TTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTT 370 |||||| | ||| ||| | | ||||| | ||||||||||||||||||| | | |||| Sbjct 520 ACGGAGTGAATCCGGTCA-CGTGTCCGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTT 578 Query 371 GCCTAGTTCCTT-CCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||| |||||||| || ||| ||||||| | ||||||||||||||||||| ||||| Sbjct 579 GCCGAGTTCCTTAACCACGA-TTCTCTCGATCGCCTTGGTATTCTCTACCTGACCAC 634 >seq40448 Length=2356 Score = 302 bits (334), Expect = 1e-79 Identities = 233/278 (84%), Gaps = 9/278 (3%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | || ||||||||||||||| | | ||||||||||| | |||||| Sbjct 102 GCATCTTCACGGGGAATTCAATTTCACTGAGCCGATGCTGGAGACAGCGGGGAGATCGTT 161 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 221 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 | |||||||||||||||||||||||||||||| | |||| || ||| | | Sbjct 222 TAGTTACGGCCGCCGTTTACCGGGGCTTCGATTCAAAGCT---------CTCACCTCTCC 272 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 |||||||||||||||||||||||||||| |||||||||||| || ||| || |||| Sbjct 273 TCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCATCTCTCGATTTCGCAG 332 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 || ||||||||||| ||||||||||| | |||||| Sbjct 333 AGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGT 370 >seq40447 Length=4142 Score = 295 bits (326), Expect = 2e-77 Identities = 323/430 (75%), Gaps = 27/430 (6%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||||||| | || ||||||||| ||||| | ||||||||| Sbjct 1267 CGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGCATGTCCTGGAGACAGT 1326 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1327 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1386 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| ||||||||||||||||||| ||||||| | ||||||| || Sbjct 1387 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTCATTTCAGAGCTT-GC---- 1441 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||| || ||||||||| |||||||||||||||||| ||||||||||| ||| Sbjct 1442 ----ACCCCTCCACTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTT 1497 Query 241 ----TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTC 296 || || |||||| |||||||||| ||||||||||| | ||||| | | | Sbjct 1498 GAAGCCGACTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGC 1557 Query 297 GACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGT 356 || | | |||| || | ||| || | |||||| |||||| Sbjct 1558 CCCCTCAAAGTGCTTGCGCA--TAGT------------GAGGGCCTCCTTCTTCCGAAGG 1603 Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 ||||| | | |||||| ||||||||| | ||||||||||||||||||||| |||| Sbjct 1604 TACGGAGGCAATTTGCCGAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCT 1663 Query 417 ACCCAACCAC 426 ||| ||||| Sbjct 1664 ACCTGACCAC 1673 >seq121782 Length=912 Score = 230 bits (254), Expect = 6e-58 Identities = 265/352 (75%), Gaps = 6/352 (2%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||| || | | ||||||| | |||||| ||| |||||||| | ||||| Sbjct 562 GCATCTTTACTCGTACTGCAATTTCGCCGAGTCTGTGGTTGAGACAGCAGAGAAGTCGTT 621 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 622 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 681 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT--CGCGTTAG--CTAACCC 188 | ||||| ||||||||||| ||||||| || ||||| | | || ||||| Sbjct 682 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCACCCCGAAGGATTAACCG 741 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | |||||||||| ||||||||||||||||| || ||||| || ||| || || Sbjct 742 GTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTACGACTTC 801 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 ||| | ||||||||||| ||||||||||| | ||||| ||| ||||| || || Sbjct 802 GCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACCACCACCAG 861 Query 309 CTTACGGAGCA-AGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359 || | | | ||| | ||||| || ||| | ||||||||||||||||| Sbjct 862 CTCAGACCGTACAGT-CGTCACCAGCAATGGCCCCCCTTCTCCCGAAGTTAC 912 >seq224338 Length=298 Score = 214 bits (236), Expect = 5e-53 Identities = 228/298 (77%), Gaps = 6/298 (2%) Strand=Plus/Plus Query 69 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATG 60 Query 129 GTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC----GTTAGCTA 184 ||||| ||||| ||||||||||| ||||||| || |||||||| | ||| Sbjct 61 GTTATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCGCTCCGAAGAACTA 120 Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGT 244 ||| | |||||||||| ||||||||||||||||| || |||||||| ||| || Sbjct 121 ACCGGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCATATACGTCGTCTTGCGA 180 Query 245 GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCA 304 || ||| | ||||||||||| ||||||||||| | |||||| ||| ||||| | Sbjct 181 CTTAGCATGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGACC-AAA 239 Query 305 TGAGCTTACGGAGCAA-GTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGG 361 | || |||| | |||||| | ||| | ||||||||||||||||||| Sbjct 240 CCACGCTAGCCCGCAAGGGGCTTCACGCGACTCGGTCCCCCTTCTCCCGAAGTTACGG 297 >seq54618 Length=301 Score = 161 bits (178), Expect = 2e-37 Identities = 212/290 (73%), Gaps = 24/290 (8%) Strand=Plus/Plus Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCA 190 ||| |||||||||||||||||||||||||||||| | |||| || ||| | Sbjct 1 TATAGTTACGGCCGCCGTTTACCGGGGCTTCGATTCAAAGCT---------CTCACCTCT 51 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTG 249 | |||||||||||||||||||||||||||| ||||||||||| ||| | | || | Sbjct 52 CCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTACAGACTTCG 111 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGC 309 ||||| ||||||||| |||||||||||| | ||||| ||| | || || | | Sbjct 112 CAGAGCCCTGTGTTTTAGATAAACAGTCGCCACCCCCTGG--TCTGTGCCCCTCA-GTCC 168 Query 310 TTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTT 369 | | | | | | || | ||| | |||| |||||||||||||| | | | Sbjct 169 T--------ACTTGCGTAAAACTGA--GGC-CTCCTTATCCCGAAGTTACGGAGGCAAAT 217 Query 370 TGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 |||| ||||||||| | ||||||||||||||||||||||| ||||||| Sbjct 218 TGCCGAGTTCCTTCAGCATAGTTCTCTCAAGCGCCTTGGTATACTCTACC 267 >seq215055 Length=728 Score = 147 bits (162), Expect = 5e-33 Identities = 176/234 (75%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACC 187 |||||| |||||||||||||||||| |||||||| |||| ||||||| | ||||| Sbjct 497 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTCAAACGCTTCGCTTACCCTAACG 556 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 || | |||||||||| |||||||||||| |||| ||||||||| | ||| | || Sbjct 557 CCCTTCCTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTACAACTT 616 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGA 307 ||| | ||||||||||| ||||||||||| |||||||| ||| || || ||| Sbjct 617 CGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTGGGCCTGGTCTCTGCGGCCATCAT-C 675 Query 308 GCTT-ACGGAGCAAGTCCTTCACCCTCA-CCGGCGCACCTTCTCCCGAAGTTAC 359 |||| | ||| || | | | | | ||||| | ||||||||||||||||| Sbjct 676 GCTTCGCACAGCTTGT-GTGCTCACGAATCCGGCCCCCCTTCTCCCGAAGTTAC 728 >seq200237 Length=261 Score = 125 bits (138), Expect = 2e-26 Identities = 96/114 (84%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||| || | | ||||||| | ||||| ||| ||||||||||| ||||| Sbjct 114 GCATCTTTACTCGTACTGCAATTTCGCCGAGTCCACGGTTGAGACAGCGCCCAAGTCGTT 55 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 54 ACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1 >seq216068 Length=553 Score = 91.5 bits (100), Expect = 4e-16 Identities = 191/281 (68%), Gaps = 9/281 (3%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 135 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGGCAATCATCGAGACAGCTGTTGT 194 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 195 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 254 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC---GTTAG-- 181 || | || | || ||||||| || | |||| || |||| | || | | |||| Sbjct 255 CCCTCATAGGTAAGGCCGCCATTGATTGGGGTATCCTTCAAAACCTACCCTAATTTAGTG 314 Query 182 --CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 ||| ||| |||||| || || |||||| |||||| | |||| | | | Sbjct 315 GAGTAAGAAAATCCGTTAACCAGCCAACATTGGGCAGAAATCACACTCAATACTTTGATT 374 Query 240 T-TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | | || |||| |||||| |||||| | |||||||||| Sbjct 375 TGCCATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 415 >seq242598 Length=676 Score = 89.7 bits (98), Expect = 1e-15 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 201 TTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGT 260 |||| |||||||||||| |||| ||||||||| | |||||| || ||||||| |||| Sbjct 1 TTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTTCGATTTAGCAGAGTCCTGT 60 Query 261 GTTTTTAATAAACAGTCGCAGCGGCCT 287 |||||| |||||||||||| ||||| Sbjct 61 GTTTTTGATAAACAGTCGCCTGGGCCT 87 >seq216069 Length=282 Score = 75.2 bits (82), Expect = 3e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| |||||||| |||||||||||||| | |||||| ||||||||| ||||||| Sbjct 214 GGCACACCTTCTTCCGAAGTTACGGTGTCAATTTGCCGAGTTCCTTCATGATTGTTCTCT 155 Query 397 CAAGCGCCTTGGTATTCTC 415 |||||||||| | || ||| Sbjct 154 CAAGCGCCTTAGAATACTC 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1257306537536