Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq224339 315 2e-83 seq121782 291 2e-76 seq40447 286 7e-75 seq40448 273 5e-71 seq224338 271 2e-70 seq215055 197 3e-48 seq54618 149 1e-33 seq242598 138 2e-30 seq200237 138 2e-30 >seq224339 Length=700 Score = 315 bits (348), Expect = 2e-83 Identities = 290/372 (78%), Gaps = 24/372 (6%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| |||||| |||||||||| || ||||| Sbjct 222 GCATCTTTACTCGTAGTGCAATTTCGCCGAGTTCGCGGTTGAGACAGCTGGGAAGTCGTT 281 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 282 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 341 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||| ||||||||||||||||||||| |||| |||||| ||||| ||| Sbjct 342 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCAGAGCTTCGTCGAAACTAACCCTTCC 401 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| Sbjct 402 TCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTCGCAC 461 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT----------- 295 |||||||||||| |||||||||||||| || |||||||||||| Sbjct 462 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCACTGGTCTCTGCGGCCTTCAACGCTCAC 521 Query 296 ------------GTCA-TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCC 342 |||| | | ||| ||||||||||| ||||||||||| ||||||||| Sbjct 522 GGAGTGAATCCGGTCACGTGTCCGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCC 581 Query 343 GAGTTCCTTAAC 354 |||||||||||| Sbjct 582 GAGTTCCTTAAC 593 >seq121782 Length=912 Score = 291 bits (322), Expect = 2e-76 Identities = 241/293 (82%), Gaps = 6/293 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| |||||||| | |||||||||| || ||||| Sbjct 562 GCATCTTTACTCGTACTGCAATTTCGCCGAGTCTGTGGTTGAGACAGCAGAGAAGTCGTT 621 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 622 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 681 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT-----CGATTGCTCTAACA 181 ||||||| ||||||||||||||||||||| ||| | |||| ||| | | |||| Sbjct 682 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCACCCCGAAGGAT-TAACC 740 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 | ||| |||||||||||||||||||||||||||||| | ||||||||||||| |||||| Sbjct 741 GGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTACGACTT 800 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 ||| |||||||||||| |||||||||||||| || |||||||| || Sbjct 801 CGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCTCTGGTCTCTGCGACC 853 >seq40447 Length=4142 Score = 286 bits (316), Expect = 7e-75 Identities = 291/379 (77%), Gaps = 24/379 (6%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||| | ||| | | | ||||||||| || Sbjct 1273 TACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGCATGTCCTGGAGACAGTGGGGAA 1332 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1333 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1392 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| |||||| | |||| || |||| || Sbjct 1393 CCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTCATTTCAGAGC-----TTGC----AC 1443 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG----C 236 ||| |||||||||| |||||||||||||||||| ||||||| |||||||| | Sbjct 1444 CCCTCCACTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCC 1503 Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT- 295 ||||||||||| |||||||||||| |||||||||||| ||| || ||| ||| Sbjct 1504 GACTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGCCCCCTC 1563 Query 296 ---GT-------CATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAG 345 || ||||| ||| | |||||| || ||| ||||| | || ||||||||| Sbjct 1564 AAAGTGCTTGCGCATAGTGAGGGCCTCCTTCTTCCGAAGGTACGGAGGCAATTTGCCGAG 1623 Query 346 TTCCTTAACAATAGTTCTC 364 |||||| | | | ||||| Sbjct 1624 TTCCTTCAGGACACTTCTC 1642 >seq40448 Length=2356 Score = 273 bits (302), Expect = 5e-71 Identities = 284/374 (76%), Gaps = 20/374 (5%) Strand=Plus/Plus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||||| ||| | || | ||||||| | | | Sbjct 97 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGCCGATGCTGGAGACAGCGGGGAGA 156 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 157 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 216 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 ||||||||||||||||||||||||| ||||||| ||| | ||||| || Sbjct 217 CGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATTC---------AAAGCTCTCACC 267 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 ||| ||||||||||| |||||||||||||||||| ||||||| || ||| ||| || Sbjct 268 TCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCATCTCTCGATTT 327 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC------T 295 ||||| ||||||||||| |||||||||||| ||| ||| ||| || | Sbjct 328 CGCAGAGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTGCCACCCACATAT 387 Query 296 G-----TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCT 350 | || | | || | ||| |||| |||||||| | || |||||| ||||||| Sbjct 388 GGTTGCCCACATATGGGTCTCGCTTATCCCGAAGTTACGCGAGCAATTTGCCTAGTTCCT 447 Query 351 TAACAATAGTTCTC 364 | | || |||||| Sbjct 448 TCAGCATCGTTCTC 461 >seq224338 Length=298 Score = 271 bits (300), Expect = 2e-70 Identities = 202/236 (86%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 63 CGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 122 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATG 60 Query 123 GTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT----TGCTCTA 178 ||||||||||| ||||||||||||||||||||| ||| | |||||| | | ||| Sbjct 61 GTTATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCGCTCCGAAGAACTA 120 Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 || | ||| |||||||||||||||||||||||||||||| | ||||| ||||||||||| Sbjct 121 ACCGGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCATATACGTCGTCTTGCGA 180 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 ||||||| |||||||||||| |||||||||||||| ||| |||||||| || Sbjct 181 CTTAGCATGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGACC 236 >seq215055 Length=728 Score = 197 bits (218), Expect = 3e-48 Identities = 211/290 (73%), Gaps = 38/290 (13%) Strand=Plus/Plus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | ||||||||||||||| | | |||||||||||||| |||| Sbjct 418 CGGCATCTTCACCGATACTACAATTTCACCGAGCTCGTGGCTGAGACAGTGCCCAGATCG 477 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||||||| ||||| | Sbjct 478 TTACACCATTCGTGCAGGTCG--------------------------------------T 499 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 |||||||||||||||||||||||||||||| ||| | |||||| || | ||||| Sbjct 500 TATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTCAAACGCTTCGCTTACCCTAACGCCC 559 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 ||||||||||||||||||||||||| ||||| |||||||| | |||| | |||| || Sbjct 560 TTCCTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTACAACTTCGC 619 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 | |||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 620 ACGGACCTGTGTTTTTAGTAAACAGTCGCTTGGGCCTGGTCTCTGCGGCC 669 >seq54618 Length=301 Score = 149 bits (164), Expect = 1e-33 Identities = 185/253 (73%), Gaps = 23/253 (9%) Strand=Plus/Plus Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 |||||||||||||||||||||| ||||||| |||| ||| || || | Sbjct 1 TATAGTTACGGCCGCCGTTTACCGGGGCTTCGATTCAAAGCT---------CTCACCTCT 51 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC-GACTTAG 243 || ||||||||||| |||||||||||||||||| ||||||| ||||||| | ||||| | Sbjct 52 CCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTACAGACTTCG 111 Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGC------GGCCT-- 295 |||| |||||||||| | ||||||||||| ||| ||| ||| | ||| Sbjct 112 CAGAGCCCTGTGTTTTAGATAAACAGTCGCCACCCCCTGGTCTGTGCCCCTCAGTCCTAC 171 Query 296 ----GTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 || | | |||| | |||| |||| ||||||||| | || |||||||||||||| Sbjct 172 TTGCGTAAAACTGAGGC-CTCCTTATCCCGAAGTTACGGAGGCAAATTGCCGAGTTCCTT 230 Query 352 AACAATAGTTCTC 364 | ||||||||| Sbjct 231 CAGCATAGTTCTC 243 >seq242598 Length=676 Score = 138 bits (152), Expect = 2e-30 Identities = 128/160 (80%), Gaps = 3/160 (2%) Strand=Plus/Plus Query 195 TTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGT 254 ||||||||||||||||| ||||| |||||||| | |||| ||| |||||||| ||||| Sbjct 1 TTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTTCGATTTAGCAGAGTCCTGT 60 Query 255 GTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG--ACAGGCACCC 312 ||||||| ||||||||||| ||||||| ||| |||||||| ||| | ||| | Sbjct 61 GTTTTTGATAAACAGTCGCCTGGGCCTCTTCACTGCGGCC-AACATTGCTGTTGGCGTCT 119 Query 313 CTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||||| || |||||||| | |||||||| ||||||||| Sbjct 120 CTTCTTCCGAAGTTACGAGACTATTTTGCCTAGTTCCTTA 159 >seq200237 Length=261 Score = 138 bits (152), Expect = 2e-30 Identities = 99/114 (87%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| ||||||| | |||||||||| |||||| ||||| Sbjct 114 GCATCTTTACTCGTACTGCAATTTCGCCGAGTCCACGGTTGAGACAGCGCCCAAGTCGTT 55 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 || || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 54 ACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1059456270208