Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq147260 235 9e-60 seq123 208 1e-51 seq172168 168 1e-39 seq17638 136 6e-30 seq82506 84.2 3e-14 >seq147260 Length=267 Score = 235 bits (260), Expect = 9e-60 Identities = 159/177 (90%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 92 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 151 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| | |||| ||||||||||||||||||| || Sbjct 152 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCGGCG 210 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | ||||||||||||||||||||||||||||||||||| ||| Sbjct 211 ACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAAT 267 >seq123 Length=7390 Score = 208 bits (230), Expect = 1e-51 Identities = 214/282 (76%), Gaps = 37/282 (13%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4793 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 4852 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------C 116 | |||| || | |||| |||| | |||||||||||||| | Sbjct 4853 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGC 4910 Query 117 CAGCCAC-----CAACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 ||| | | ||| | ||| ||| | |||||||||||| || Sbjct 4911 CAGTGAGTTGCGCGACCGAAATCGCGCACACCTAAATGACGACGCCTATTTAGCAGGCTA 4970 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 4971 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 5030 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||| | |||||||| Sbjct 5031 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 5072 >seq172168 Length=312 Score = 168 bits (186), Expect = 1e-39 Identities = 144/174 (83%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 173 ACTCGCTGGCTGTATCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 114 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC- 120 |||||||||||||| ||||||||| | | | ||||||||||||||||| |||| Sbjct 113 CCTGTTATTGCCTCGAACTTCCATCAGATTTTCTCTGATAGTCCCTCTAAGAAG-CAGCA 55 Query 121 CACCAAC-CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173 |||||| | || | | ||||||||| |||| |||||||||||||||||| Sbjct 54 AACCAACAGAATGTTAGTCGCGCTATTTAGTAGGTCAAGGTCTCGTTCGTTATC 1 >seq17638 Length=4506 Score = 136 bits (150), Expect = 6e-30 Identities = 101/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||| | || ||| |||||||||||||||||||||| Sbjct 1555 ACCTGTTATTGCCTCCAACTTCCATCGACTAATCGCCGATAGTCCCTCTAAGAAGCCAGC 1496 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 |||| || ||| || ||||||||||||||| ||||||||||||||||||||||| Sbjct 1495 GACCAGCCGTAGCCGGCCGGGCTATTTAGCAGGAGAAGGTCTCGTTCGTTATCGGAAT 1438 Score = 93.3 bits (102), Expect = 7e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2007 ACTCGCTGGATCGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1949 >seq82506 Length=2398 Score = 84.2 bits (92), Expect = 3e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||||| || ||| ||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 1822 ACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCAGCCCGGAACATCTAAGGGCATCACAG 1880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794661196323