Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq305 351 2e-94 seq9121 187 4e-45 seq22537 129 1e-27 seq40447 80.6 5e-13 seq121782 78.8 2e-12 >seq305 Length=2271 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||||| | |||||||||||||||||||||||||||| Sbjct 751 TACTGAGCAGTATTACTATCGCAACGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTC 692 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 691 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 632 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 631 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 572 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 571 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 513 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 512 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 472 >seq9121 Length=2123 Score = 187 bits (206), Expect = 4e-45 Identities = 173/215 (80%), Gaps = 16/215 (7%) Strand=Plus/Minus Query 31 TCAT-CAGTAGGGTAAAACTAACCTGTCTCATGACGG----TCTAAACCCAGCTCACGTT 85 |||| |||||||||||||||||||||||||| ||||| |||||||||| |||||||| Sbjct 650 TCATACAGTAGGGTAAAACTAACCTGTCTCACGACGGACGGTCTAAACCCATCTCACGTT 591 Query 86 CCCTATTAGTGGGT-----GAACAATCCAACGCTT---ACCGAATTCTGCTTCGGTATGA 137 || | || |||| |||||||||||| ||| | | || | || || |||| Sbjct 590 CCTCAGTACCGGGTCCTCAGAACAATCCAACACTTCGTAACATATACA-CTACG--ATGA 534 Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 | |||||| ||||||||||| ||||||||||| |||||||||| |||| | |||| || Sbjct 533 TCAGAAGAGACGACATCGAAGAATCAAAAAGCAGAGTCGCTATGATCGCTCGCCTGCTAC 474 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 |||||||||||||||||||||||||||| | |||| Sbjct 473 AAGCCAGTTATCCCTGTGGTAACTTTTCCGTCACC 439 >seq22537 Length=3125 Score = 129 bits (142), Expect = 1e-27 Identities = 76/79 (96%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACAC 276 |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 204 TAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGATCTAAAGGATCGATAGGCCACAC 145 Query 277 TTTCATGGTTTGTATTCAC 295 ||||||||||||||||||| Sbjct 144 TTTCATGGTTTGTATTCAC 126 Score = 122 bits (134), Expect = 1e-25 Identities = 75/80 (94%), Gaps = 4/80 (5%) Strand=Plus/Minus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1671 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 1612 Query 151 CATCGAAGGATCAAAAAGCA 170 |||| || ||||||||| Sbjct 1611 CATC----GACCAAAAAGCA 1596 Score = 93.3 bits (102), Expect = 7e-17 Identities = 51/51 (100%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1154 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 1104 >seq40447 Length=4142 Score = 80.6 bits (88), Expect = 5e-13 Identities = 127/181 (70%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || || |||||||| |||| ||| |||||||||||||| || ||| | || ||||| Sbjct 733 ACCAAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCACTTTAATCGGCGAACAGC 792 Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 | ||| ||| ||| | || | | | ||| || ||||||||||||| | || Sbjct 793 CAAACCCTTGGGACC---TGCTCCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCA 849 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 || | | ||||| ||||||| ||||| | | |||| |||||||| | ||| |||| Sbjct 850 AACAACCCCGTCGATATGAACTCTTGGGGGTTATCAGCCTGTTATCCCCGGCGTACCTTT 909 Query 224 T 224 | Sbjct 910 T 910 >seq121782 Length=912 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| |||| ||||| ||||| Sbjct 8 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACC 67 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | | | || | | ||| || ||||||||||||| | |||| Sbjct 68 CTTGGGACCTACTCCAGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCAT 124 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| |||| || ||||| | |||| |||||||| | |||| ||||| Sbjct 125 CCCGTCGATATGGACTCTTGGGGAAGATCAGCCTGTTATCCCCGGGGTACCTTTT 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852032602848