Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq215055 197 3e-48 seq121782 93.3 8e-17 seq40447 89.7 1e-15 >seq215055 Length=728 Score = 197 bits (218), Expect = 3e-48 Identities = 172/214 (80%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| Sbjct 230 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTTCAAAGGTACCCT 171 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 |||| | ||| |||| |||| | |||| || |||| ||||||| ||||||| || ||| Sbjct 170 CAGCACGCTTGGTAACCGTGCGTAGAGTGTAATGGCATAAGGGTGCTTGACTGTGAGACC 111 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| | |||| |||||| || | || |||||||| ||| ||| |||||| ||| Sbjct 110 TACAAGTCGATCAGGTGCGAAAGCAGGACATAGTGATCCGGTGGTTCTGTATGGAAGGGC 51 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| | ||||||||| ||| | ||||||| Sbjct 50 CATCGCTCAAAGGATAAAAGGTACTCCGGGGATA 17 >seq121782 Length=912 Score = 93.3 bits (102), Expect = 8e-17 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||| || ||| ||||| | ||||||| || || || ||| |||||||||||||||| Sbjct 289 AGTGTAAGTGCACAAGGGAGCTTGACTGTGAGACTGACATGTCGAGCAGGGACGAAAGTC 230 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 ||| || ||||||||| | ||||| | ||||||| ||||||||||| |||| Sbjct 229 GGGACTAGTGATCCGGCACCGGCTTGTGGAAGCGGTGTCGCTCAACGGATAAAAGGTACC 170 Query 331 CTGGGGATA 339 | ||||||| Sbjct 169 CCGGGGATA 161 >seq40447 Length=4142 Score = 89.7 bits (98), Expect = 1e-15 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310 ||| ||||| |||||||||||| | || |||||||| ||| | | ||||| |||| ||| Sbjct 980 GTCGAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTCCCGCGTGGAAGGGCCATCG 921 Query 311 CTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| ||||||||||| ||| | ||||||| Sbjct 920 CTCAACGGATAAAAGGTACGCCGGGGATA 892 Score = 84.2 bits (92), Expect = 4e-14 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 125 CGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAG 178 |||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1079 CGGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAATGTAACGGAGGCGCCCAAAG 1026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979677936608