Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq40447 143 3e-32 seq200237 138 1e-30 seq40448 136 4e-30 seq224339 131 2e-28 seq121782 131 2e-28 seq215055 129 6e-28 seq224338 96.9 4e-18 >seq40447 Length=4142 Score = 143 bits (158), Expect = 3e-32 Identities = 120/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||||| || |||||||||| || | | ||||||| ||| Sbjct 1248 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 1307 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||| | ||||||| ||| |||||||||||||||||||||||||| Sbjct 1308 AGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 1367 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 1368 GACAAGGAATTTCGCTACCTTAGGACCGTTA 1398 >seq200237 Length=261 Score = 138 bits (152), Expect = 1e-30 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| |||| |||| ||||||| || |||| ||||||| | | Sbjct 145 CGGGGTCTTTCCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTACTGCAATTTCGCCG 86 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || |||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 85 AGTCCACGGTTGAGACAGCGCCCAAGTCGTTACTCCATTCGTGCAGGTCGGAACTTACCC 26 Query 143 GACAAGGAATTTCGCTACCTTAGGA 167 ||||||||||||||||||||||||| Sbjct 25 GACAAGGAATTTCGCTACCTTAGGA 1 >seq40448 Length=2356 Score = 136 bits (150), Expect = 4e-30 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | ||| || | | |||||||||| | | | ||||||||||||| Sbjct 73 GGGTCTTTCCGTCTGACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTGAG 132 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | | | ||||||| ||| |||||||||||||||||||||||||||| Sbjct 133 CCGATGCTGGAGACAGCGGGGAGATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGA 192 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 193 CAAGGAATTTCGCTACCTTAGGACCGTTA 221 >seq224339 Length=700 Score = 131 bits (144), Expect = 2e-28 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| ||| |||| ||||||| || || | ||||||| | | Sbjct 191 CGGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCG 250 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || |||||||||||| ||| |||||||||||||||||||||||||| Sbjct 251 AGTTCGCGGTTGAGACAGCTGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 310 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 311 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 369 >seq121782 Length=912 Score = 131 bits (144), Expect = 2e-28 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||||||||| |||| |||| ||||||| || |||| ||||||| | | Sbjct 531 CGGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTACTGCAATTTCGCCG 590 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || ||||||||||| ||| |||||||||||||||||||||||||| Sbjct 591 AGTCTGTGGTTGAGACAGCAGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 650 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 651 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 709 >seq215055 Length=728 Score = 129 bits (142), Expect = 6e-28 Identities = 91/108 (84%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 391 GGGTCTTTTCGTCCCATTGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCGAG 450 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCG 132 ||| || |||||||| |||||||||||||||||||| Sbjct 451 CTCGTGGCTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCG 498 >seq224338 Length=298 Score = 96.9 bits (106), Expect = 4e-18 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 4 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTT 63 Query 173 ANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 | |||||||||||||| Sbjct 64 ATAGTTACCACCGCCGTTTACTGGGGCTT 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545731183017