Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq132282 82.4 1e-13 seq261323 78.8 1e-12 >seq132282 Length=2765 Score = 82.4 bits (90), Expect = 1e-13 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 60 CGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTC 119 ||||||||| || ||||| ||||||||||| || || || | ||| || || ||||| Sbjct 1447 CGGTGCCGGAGCCAGTTCCACCACCTTCTGGTGCCGGCGCTGGACCGAACAGTCACGGTC 1506 Query 120 GCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGG 179 | ||||||||| ||| ||| ||| ||||| || | ||||| || | ||| || || Sbjct 1507 GAACAGGTGGATCACGTCGCCGTGGGTGTCGGCGAGGATCTGCACCTCGATGTGCCGGGG 1566 Query 180 GTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAAC 222 | | ||| | || || ||| | ||| ||| || |||||| Sbjct 1567 TTCGATCACGGCCTGCTCGAGGAACACCGTCGCGTCCCCGAAC 1609 >seq261323 Length=325 Score = 78.8 bits (86), Expect = 1e-12 Identities = 87/116 (75%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 61 GGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCG 120 || || ||||| || ||||| ||||||||||| || || || ||||| ||||| || Sbjct 159 GGCGCGGGCGCCTCCTCCAGCACCTTCTGGTGGCGGCGCTGGGTGGAGCAGTCGCGCTCA 100 Query 121 CCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 || ||||||| | ||||||| || |||||| || || ||||| || | ||| || Sbjct 99 CCGAGGTGGACGACGTGGCCGTGAGCGTCGGCGAGCACCTGCACCTCGATGTGCCG 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734024398210