Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq29733 710 0.0 seq41844 336 8e-90 seq40448 327 4e-87 seq41843 288 4e-75 seq40447 269 1e-69 seq41820 266 1e-68 seq64689 239 2e-60 seq104245 210 8e-52 seq255881 194 6e-47 seq41845 145 3e-32 >seq29733 Length=2375 Score = 710 bits (786), Expect = 0.0 Identities = 519/600 (87%), Gaps = 2/600 (0%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||||||| | |||| || ||||||||||||| ||||| |||||||| |||||||||| Sbjct 1642 TCGACTACGAACCTTA-TCGCCCGCAGTCTCACTGCCGCACTCTCACTCACCGGCATTCG 1584 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| ||||| || ||| | ||||||||| ||||||||||| Sbjct 1583 GAGTTTGGCTGACATCAGTAACCTTGTAGGGCCCATCCGCCATCCAGTAGCTCTACCTCC 1524 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1523 GGTGAGAAACATGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGGAG 1464 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| |||||| |||||||||| |||||||| |||||||| Sbjct 1463 TTTGATTGGCCTTTCACCCCTACCCACAGCTCATCCCCTCCATTTTCAACTGAAGTGGGT 1404 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||| |||||||| |||||||| ||||||| |||| |||||| ||||||||| ||||| Sbjct 1403 TCGGGCCTCCACGTCGTCTTACCGACGCTTCACCCTGGCCATGGGTAGATCACTCCGCTT 1344 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359 ||||||| || | |||||| | |||||| ||| ||||||||||||||||||||||||| Sbjct 1343 CGGGTCTAGAACACGCCACTGAACCGCCCTGTTCAGACTCGCTTTCGCTACGGCTACCCC 1284 Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 ||||||||||||||||| || | | | |||||||||||||||||||||||||||||||| Sbjct 1283 ACACGGGTTAACCTCGCCACGTACCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 1224 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 ||||| ||| || || | |||| |||||||||||||| || |||||||||| Sbjct 1223 ATCACCCACCACCACAAGGGTGCACAGGCTCTGACGGATTGTAGGCGCACGGTTTCAGGT 1164 Query 480 ACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTAT 539 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1163 ACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTAGTCCGCTAT 1104 Query 540 CGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||||| |||||||| ||||||| |||||||||||| |||||||||| | |||||| Sbjct 1103 CGGTCACCAGGGAGTATTCAGGCTTACCGGGTGGTCCCGGCAGATTCACAGCAGATTTCA 1044 >seq41844 Length=219 Score = 336 bits (372), Expect = 8e-90 Identities = 206/219 (94%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 186 TGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTC 245 |||||||||||||||| |||||| |||||||| |||||||||| |||||||||||| Sbjct 219 TGGCCTTTCACCCCTACCCACAGCTCATCCCCCAGGTTTTCAACCCTGGTGGGTTCGGTC 160 Query 246 CTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 159 CTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 100 Query 306 TTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG 365 ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 99 TTGATCGCGCCACTCAGTCGCCCTATTCGGACTCGCTTTCGCTACGGCTTCCCCACACGG 40 Query 366 GTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTC 404 |||||||| |||||||||||||||||||||||||||||| Sbjct 39 GTTAACCTTGCGACACAACGCAAACTCGCAGGCTCATTC 1 >seq40448 Length=2356 Score = 327 bits (362), Expect = 4e-87 Identities = 424/592 (72%), Gaps = 48/592 (8%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| | ||| |||| | ||| | |||| | |||||||| ||| | || ||||| Sbjct 978 TCGACGATGGACCTTAG-CACCCACCGTCTGTCTGCCGCGCTAA-ACTCACGGGTATTCG 1035 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGG-GCCCCCTAGACCATCCAGTGCTCTACCTCC 119 |||||||||| || ||||||| | ||| ||||||||| ||||||||||||||||| || Sbjct 1036 GAGTTTGGTTAGGTTTGGTAAGCCTTTGGAGCCCCCTAGCCCATCCAGTGCTCTACCCCC 1095 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 | ||||||||||| | |||||||| |||||| ||||||||||||||| | || Sbjct 1096 CGTGGTCAACACGCGACGATCTACCTAAATAGATTTCGCGGAGAACCAGCTATCTCCGAG 1155 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| |||||| |||||||| |||||||| |||||| Sbjct 1156 TTTGATTGGCCTTTCACCCCTAGCCACAGCTCATCCCCGACTTTTTCAACAGGCGTGGGT 1215 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||| |||||| || ||||| ||||| |||| |||||| ||||||||| | || Sbjct 1216 TCGGCCCTCCAGTGCGTGTTACCGCACCTTCAGCCTGGCCATGGCTAGATCACTCGGTTT 1275 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359 |||||||| | || ||| | ||||||||||| |||||||||| Sbjct 1276 CGGGTCTTCTACCAGCAACT-AAACGCCCTATTCAGACTCGCTTT--------------- 1319 Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 |||| | | |||| | ||||||| ||||| Sbjct 1320 ---------------NNNNNNNNNNNNNNNNTCGCTGACCCATTATACAAAAGGTACGCC 1364 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 ||||| || | || | |||||||| | ||||| ||| |||||||||| Sbjct 1365 GTCAC------CCAACAA------TGGGCTCCGACTGCTTGTAAGCATCCGGTTTCAGGT 1412 Query 480 ACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTA 538 || ||||||||||| | ||||| |||||||||||||||||||||||||||| | ||| Sbjct 1413 -CTCTTTCACTCCCCTCGTCGGGGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCACTA 1471 Query 539 TCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 |||||||||| ||||||||||||||| |||||||||| ||| |||| || Sbjct 1472 TCGGTCACCAGGGAGTATTTAGGCTTGGAGGGTGGTCCCCCCACGTTCAGAC 1523 >seq41843 Length=212 Score = 288 bits (318), Expect = 4e-75 Identities = 191/212 (90%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 |||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| || Sbjct 212 CCCTATCCACAGCTCATCCCCTCGGTTTTCAACCCAAGTGGGTTCGGTCCTCCACGACGT 153 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCC 316 |||||| |||||||||||| ||||||||||||||||||||||||||||| | | ||| Sbjct 152 CTTACCGTCGCTTCAACCTGGCCATGGATAGATCACTTCGCTTCGGGTCTAGGGCATGCG 93 Query 317 ACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGC 376 ||||| |||| ||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 92 ACTCAAACGCTCTATTCGAACTCGCTTTCGCTACGGCTACCCCTCACGGGTTAACCTCGC 33 Query 377 GACACAACGCAAACTCGCAGGCTCATTCTTCA 408 ||| | ||| ||||||||||||||||||||| Sbjct 32 CACATACCGCTAACTCGCAGGCTCATTCTTCA 1 >seq40447 Length=4142 Score = 269 bits (298), Expect = 1e-69 Identities = 424/603 (70%), Gaps = 52/603 (9%) Strand=Plus/Plus Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62 ||| ||||| |||| | ||||| |||| | |||| | ||||| || ||||||| Sbjct 2222 GACGACGGACCTTAG-CACCCGCCGTCTGTCTCCCGCA-TATCACTCTTAGGTATTCGGA 2279 Query 63 GTTTGGTTGATTTCGGTA-AGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCGG 121 |||||||| || |||| | || | | |||||||| ||||||||||||||||| || Sbjct 2280 GTTTGGTTAGGTTTGGTAGATCTCGCGA-CCCCCTAGCCCATCCAGTGCTCTACCCCCT- 2337 Query 122 GAAGAAACACG--CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 ||| || ||| || |||| ||| ||||| |||||||||||||| | | Sbjct 2338 -AAGGTGTTCGTGCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGG 2396 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||| ||||||| | | |||||||| | | | ||| Sbjct 2397 TTTGATTGGCCTTTCACCCCTACCCACAAGTCATCCGGTAACTTTTCAACGTTAATCGGT 2456 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||| |||||| | |||| ||||| |||| |||| |||||| | Sbjct 2457 TCGGACCTCCAGTGCATGTTACTGCACCTTCATCCTGGTCATGCCTAGATCGC------- 2509 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359 ||||| ||||||||| |||||||||||||| || |||| || Sbjct 2510 CGGGT--------------------GCCCTATTCAGACTCGCTTTCGCTGCGCCTACACC 2549 Query 360 ACACGGGTTAACCTCGC--GACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417 ||| |||| || || || ||| || || ||| | |||| | ||| ||| ||| Sbjct 2550 TATCGGCTTAAGCTTGCTTGATACATT---AAGTCACAGACCCATTATGCAAGAGGTACG 2606 Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477 | |||| | | |||||| | |||| || | ||||||||| ||||||| Sbjct 2607 CTGTCA----GGCCATAAAAGCC-------CTCCAACTGCTTGTAGGCAATCCGTTTCAG 2655 Query 478 GTACTATTTCACTCCCCGCCA-GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGC 536 ||||| ||||||||||| | ||||| ||||||||||||||||||||||||| || ||| Sbjct 2656 GTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCGC 2715 Query 537 TATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATT 596 |||||||| | | |||||||||||||| |||||||||| ||| |||| || |||| Sbjct 2716 TATCGGTCGCTGACGAGTATTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGACAGAATT 2775 Query 597 TCA 599 ||| Sbjct 2776 TCA 2778 >seq41820 Length=210 Score = 266 bits (294), Expect = 1e-68 Identities = 185/210 (88%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 |||||||||||| |||||||||| |||||||| ||||||||||||||||||||| || Sbjct 210 CCCTATCCACAGCTCATCCCCTCCATTTTCAACTGAAGTGGGTTCGGTCCTCCACGACGT 151 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCC 316 |||||| |||||||||||| ||||||||||||||||||||||||||||| | | ||| Sbjct 150 CTTACCGTCGCTTCAACCTGGCCATGGATAGATCACTTCGCTTCGGGTCTAGGACATGCG 91 Query 317 ACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGC 376 ||| | |||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 90 ACTGAATCGCCCTATTCAGACTCGCTTTCGCTACGGCTGCCCCACACGGGTTAACCTCGC 31 Query 377 GACACAACGCAAACTCGCAGGCTCATTCTT 406 ||| | | | ||||||||||||||||||| Sbjct 30 CACATATCACTAACTCGCAGGCTCATTCTT 1 >seq64689 Length=1551 Score = 239 bits (264), Expect = 2e-60 Identities = 175/203 (86%), Gaps = 9/203 (4%) Strand=Plus/Minus Query 396 GGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACG 455 |||||||||||||||||||||||||||||| |||| |||| | ||||| ||| Sbjct 1551 GGCTCATTCTTCAAAAGGCACGCCGTCACC-----CCTACAAGGGAG----GCTCCAACG 1501 Query 456 GATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTT 515 | ||||| ||| | ||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 1500 GTTTGTAAGCAGACGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTT 1441 Query 516 TCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTC 575 |||||||||||||||||||||||||||||| | |||||||||||||||| | ||||||| Sbjct 1440 TCCCTCACGGTACTTGTCCGCTATCGGTCATCTGGGAGTATTTAGGCTTACCAGGTGGTC 1381 Query 576 CCGCCAGATTCACACGAAATTTC 598 | | |||||||||||| ||||| Sbjct 1380 CTGGCAGATTCACACGGGATTTC 1358 >seq104245 Length=717 Score = 210 bits (232), Expect = 8e-52 Identities = 135/146 (92%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||||| |||||||| ||||| ||||||||| || |||||||||||| |||||||||| Sbjct 145 TCGACTATGGAGCTTAG-CCCCCACAGTCTCACTGCTGCGCTCTCACTTACCGGCATTCG 87 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120 |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 86 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCTTAGATCATCCAGTGCTCTACCTCCG 27 Query 121 GGAAGAAACACGCGACGCTGCACCTA 146 | ||||||||||| |||||||||||| Sbjct 26 GCAAGAAACACGCAACGCTGCACCTA 1 >seq255881 Length=344 Score = 194 bits (214), Expect = 6e-47 Identities = 270/379 (71%), Gaps = 41/379 (11%) Strand=Plus/Minus Query 186 TGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTC 245 |||||||||||||||| ||||||||||||| | |||||||| | | ||||||||| Sbjct 344 TGGCCTTTCACCCCTACCCACAGGTCATCCGAAGACTTTTCAACGTCAACCGGTTCGGTC 285 Query 246 CTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305 |||||| || ||||| |||||||||||||||||| |||||||| | |||| ||| Sbjct 284 CTCCACTTTGTGTTACCAAAGCTTCAACCTGCCCATGGGTAGATCACAAGGTTTCGCGTC 225 Query 306 TTGATCGTGC-CACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACG 364 | ||| | | ||| ||| ||||||||| ||||||||||||| Sbjct 224 -TAATCCTACTAACTAATA-GCCCTATTCAGACTCGCTTTCGC----------------- 184 Query 365 GGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCAC 424 |||| || | || |||||| ||||||||| | ||||||||||||||||| Sbjct 183 -----ACCTTGCCAGTAAAGAGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCA- 130 Query 425 CTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTAT 484 || || | | ||||||||| | |||||||| | |||||||||| || | Sbjct 129 -------CTCAA---CTTGTGAGCTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTTT 80 Query 485 TTCACTCCCCGCCA---GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCG 541 |||| ||| | | | || |||||||||||||| |||| |||||||| | |||||| Sbjct 79 TTCA--CCCTTCTATTCGAAGTGCTTTTCACCTTTCCTTCACAGTACTTGTTCACTATCG 22 Query 542 GTCACCAAGGAGTATTTAG 560 ||| |||||||||||| Sbjct 21 GTCTTTCAGGAGTATTTAG 3 >seq41845 Length=879 Score = 145 bits (160), Expect = 3e-32 Identities = 122/147 (83%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| | | |||||| |||||| | ||||||| || |||||||||||| |||||||||| Sbjct 734 TCGACGATGAAGCTTA-TCCCCCACCGTCTCACTGCTGCGCTCTCACTTACCGGCATTCG 792 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| || || | ||| | | ||||||||| ||||||||||| Sbjct 793 GAGTTTGGCTGACGTCAGTAACCTGTTGAGGCCCATCGGCCATCCAGTAGCTCTACCTCC 852 Query 120 GGGAAGAAACACGCGACGCTGCACCTA 146 || |||||||||| |||||||||||| Sbjct 853 GGCGAGAAACACGCAACGCTGCACCTA 879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1812563739392