Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq74834 275 1e-71 seq110065 235 1e-59 seq220586 141 2e-31 seq220587 123 5e-26 seq130999 116 7e-24 seq192604 91.5 3e-16 seq242504 84.2 4e-14 seq220499 77.0 6e-12 >seq74834 Length=1907 Score = 275 bits (304), Expect = 1e-71 Identities = 249/308 (81%), Gaps = 9/308 (3%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||||||||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 374 GGCGTTGCTGCATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 433 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||| | Sbjct 434 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCACCCTCTCAGGCCGGCTACCCGT 493 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| ||||||||| || |||| ||||||||| |||| || ||||||||| ||||| || | Sbjct 494 CGTAGGCTTGGTGAGCCATTACCTCACCAACAACCTGATAGGCCGCGAGTCCATCCTTGA 553 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCAT-CCTCTGA---CATTATGCGGTATTAGC 236 | | || ||||| ||| | ||||| | |||| ||| ||||||||| Sbjct 554 -CCAAAATTCTTT--CCAACTCCT--AGCCATGCGGCTGAAGCTCGTATCCGGTATTAGA 608 Query 237 GTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGT 296 |||||||||| |||| ||| | || |||||||| |||||||||||||||||||| Sbjct 609 CGTCGTTTCCAACGCTTATCCCAGAGTCAAGGGCAGGTTACTCACGTGTTACTCACCCGT 668 Query 297 CCGCCACT 304 ||||||| Sbjct 669 TCGCCACT 676 >seq110065 Length=950 Score = 235 bits (260), Expect = 1e-59 Identities = 233/299 (78%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||||||||||||||| || | ||||||||||||||| ||||||||||||||||||||| Sbjct 654 GGCGTCGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 713 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| || |||||||| ||||||||| | Sbjct 714 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGT 773 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| ||| |||| | ||||||| | || || ||||||| |||||||| | Sbjct 774 CGTCGCCTTGGTAGGCCATTACCCCACCAACAAGCTGATAGGCCGCGGGCCCATCTCGTA 833 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 | | ||| ||| | |||| ||| ||||| | ||| ||||||||| Sbjct 834 CCCA-AAAAGTTTCCACCAAGAGACATG-CATCCCAAGGTCATATTCGGTATTAGACCCA 891 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||| | |||| ||| | |||||| | | |||||||||||||||||| || Sbjct 892 GTTTCCCAGGCTTATCCCAAAGTACGAGGCAGATCACCCACGTGTTACTCACCCGTTCG 950 >seq220586 Length=203 Score = 141 bits (156), Expect = 2e-31 Identities = 87/93 (94%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||||||||| ||||| |||| ||||||| ||||||| ||||||||||||||||||||| Sbjct 111 GGCGTCGCTGCGTCAGGCTTTCGCCCATTGCGCAATATTCCCCACTGCTGCCTCCCGTAG 170 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCC 93 ||||||||||||||||||||||||| ||||||| Sbjct 171 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCC 203 >seq220587 Length=472 Score = 123 bits (136), Expect = 5e-26 Identities = 150/205 (73%), Gaps = 17/205 (8%) Strand=Plus/Minus Query 103 CTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGG 162 ||||| || |||| |||||||||||||||| || ||| | |||||||||||||||| Sbjct 472 CTCAGACCAGCTAAGGATCGTCGGCTTGGTGCGCCTTTACCACACCAACTACCTAATCCT 413 Query 163 CCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACAT 222 |||| || |||| || |||||||||||||| || | | | |||| Sbjct 412 ACGCGGGCTCATCCCTCGGCGATAAATCTTTG------GACTTACGTCATC--------- 368 Query 223 TATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACG 282 || |||||||||| |||||||||| |||||||| | | ||||| || | |||| Sbjct 367 -ATCCGGTATTAGCAGTCGTTTCCAACTGTTATTCCGAACCAAGGGGCAGATT-CCCACG 310 Query 283 TGTTACTCACCCGTCCGCCACTAAG 307 ||||| ||||||| |||||||||| Sbjct 309 CGTTACGCACCCGTGCGCCACTAAG 285 >seq130999 Length=701 Score = 116 bits (128), Expect = 7e-24 Identities = 149/206 (72%), Gaps = 17/206 (8%) Strand=Plus/Plus Query 103 CTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGG 162 ||||| || |||| |||||||| ||||||| ||| ||| | ||||||||| |||||| Sbjct 1 CTCAGACCAGCTAAGGATCGTCGCCTTGGTGCGCTCTTACCACACCAACTAGCTAATCCT 60 Query 163 CCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACAT 222 |||| || |||| | |||||||||||||| || | | | |||| Sbjct 61 ACGCGGGCTCATCCTCTGGCGATAAATCTTTG------GACTTACGTCATC--------- 105 Query 223 TATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACG 282 || |||||||||| |||||||||| |||||||| | || ||||| || | |||| Sbjct 106 -ATCCGGTATTAGCAGTCGTTTCCAACTGTTATTCCGAACCAAAGGGCAGATT-CCCACG 163 Query 283 TGTTACTCACCCGTCCGCCACTAAGC 308 ||||| ||||||| |||||||| || Sbjct 164 CGTTACGCACCCGTGCGCCACTATGC 189 >seq192604 Length=994 Score = 91.5 bits (100), Expect = 3e-16 Identities = 138/191 (72%), Gaps = 8/191 (4%) Strand=Plus/Plus Query 139 TTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGA--TAAATCTTTGGT 196 ||| ||||||||||| |||||| |||| |||||||| | | | | | | | ||| Sbjct 757 TTACCTCACCAACTATCTAATCTTGCGCGTGCCCATCTCT-ATCCACCTCAGT-TTTCAA 814 Query 197 CAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATT 256 || ||||||||||| | | | |||||| ||||||| ||| |||| ||| | ||| Sbjct 815 TAACAAATGATGCCATTC-ATTATATTATGGGGTATTAATCTTCCTTTCGAAAGGCTATC 873 Query 257 CCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAAGCTATATATC 316 || || | || |||||||| |||||||||| ||||||| |||| || || || ||| Sbjct 874 CCCCTGATAGAGCCAGGTTGCACACGTGTTACGCACCCGTACGCCGCT---CTCTAAATC 930 Query 317 CAGCAAGCTTT 327 | | ||| ||| Sbjct 931 CCGAAAGATTT 941 >seq242504 Length=650 Score = 84.2 bits (92), Expect = 4e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 100 CCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||||| ||||||||| ||| | |||||||||| ||| ||||||||||| || || Sbjct 650 CCTCTCAGGCCGGCTACCCGTCGAAGCCTTGGTGGGCCGTTACCTCACCAACTAGCTGAT 591 Query 160 CGGCCGCGAGCCCATCTTTCAGCG 183 |||||||||| |||| |||| || Sbjct 590 AGGCCGCGAGCTCATCCTTCACCG 567 >seq220499 Length=146 Score = 77.0 bits (84), Expect = 6e-12 Identities = 79/103 (77%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 223 TATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACG 282 ||| | ||||||| |||||||||| |||| ||| | | |||||||| |||||| Sbjct 128 TATCCAGTATTAGACGTCGTTTCCAACGCTTATCCCAGAGTCAGGGGCAGGTTACTCACG 69 Query 283 TGTTACTCACCCGTCCGCCACTAAGCTATATATCCAGCAAGCT 325 |||||||||||||| |||||||| || | |||||||||| Sbjct 68 TGTTACTCACCCGTTCGCCACTA----ATCCACCCAGCAAGCT 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 995633603328