Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq17638 190 2e-46 seq3178 156 5e-36 seq250703 134 2e-29 >seq17638 Length=4506 Score = 190 bits (210), Expect = 2e-46 Identities = 161/194 (83%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 269 CTAGAAACCAACAAAATAGGACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCA 210 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| | |||||||||||||||||||||| |||| |||||| ||||||||| ||| | Sbjct 209 GGCAAATACCTGCTTTGAACACTCTAATTTCTTCAAAGTAAAATCCCTGGTTCCCCCGAA 150 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182 || ||| ||||| |||| || | |||||| |||||| | || |||| |||||| | | Sbjct 149 CACCCAGTGAAGAGCATCCGAGATCACCAGGAGGTAAGCCTCCGGTAGCCCAGTACACAC 90 Query 183 CGTGAGGCGGACCA 196 | |||||||||| Sbjct 89 CAAAAGGCGGACCA 76 >seq3178 Length=420 Score = 156 bits (172), Expect = 5e-36 Identities = 105/116 (91%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 193 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 252 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct 253 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATAGTCCTGGTTCC 308 >seq250703 Length=390 Score = 134 bits (148), Expect = 2e-29 Identities = 93/104 (89%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| | |||||||||||||||||||||||||||| ||||| Sbjct 229 TCTAGAAACCAACAAAATAGAACCATACGTCCTATTCTATTATTCCATGCTAATATATTC 170 Query 65 GGGCGTAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| || |||||||||||||||||||||||||||| ||||| Sbjct 169 GAGCGAAACGCCTGCTTTGAACACTCTAATTTTCTCACAGTAAA 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593602339422