Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq104245 358 2e-96 seq41845 325 9e-87 seq29733 316 5e-84 seq40447 205 2e-50 seq40460 154 3e-35 seq40448 89.7 1e-15 >seq104245 Length=717 Score = 358 bits (396), Expect = 2e-96 Identities = 335/430 (78%), Gaps = 31/430 (7%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||| Sbjct 571 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCAGATTAGCTTGACC 512 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 ||||||||||||| |||| |||| | ||| ||| ||| ||||||||||||||| Sbjct 511 CTGGAACCCTTGGTCTTTCGGAGGACATGTTTCTCACATGTCTTTCGCTACTCATGCCTG 452 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 |||||||||||| | ||||| | |||| | || ||||||| ||||||| Sbjct 451 CATTCTCACTCGTGTGGCGTCCACGGCTGGATCACTCCGCCGCTTCACTCGCCACACGAC 392 Query 181 GCTCCCCTACCCAACCACACAGGTTG-CCACAG--------------------------- 212 ||||||||||||| || ||| | | | ||||| Sbjct 391 GCTCCCCTACCCATCCGCACGGCTGGACCACAAAGGCCTACCTATAATGCGAATTCTACG 332 Query 213 -CTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 |||||| || ||| ||||||| |||||| ||||||||||||||||||||||||||| Sbjct 331 ACTTCGGTGGTGTGCTTGAGCCCCGTTACATTGTCGGCGCGGAATCACTTGACCAGTGAG 272 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| Sbjct 271 CTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTCTGTGCAA 212 Query 332 CTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 ||||||||||||||||||| || ||| | ||||||| ||||| | | |||||||||||| Sbjct 211 CTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGACCTTAACCGGCGATCTGGGCTGT 153 Query 391 TTCCCTCTCG 400 |||||||||| Sbjct 152 TTCCCTCTCG 143 >seq41845 Length=879 Score = 325 bits (360), Expect = 9e-87 Identities = 315/407 (77%), Gaps = 31/407 (8%) Strand=Plus/Plus Query 24 TTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTGGAACCCTTGGATAATCGGCG 83 ||||| ||||||| ||||||||| || ||| || ||||||||||||||| |||| | Sbjct 331 TTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCCCTGGAACCCTTGGTCTTTCGGAG 390 Query 84 GACGGGATTCCCACCCGTCACACGCTACTCATGCCTGCATTCTCACTCGCATCAACTCCA 143 |||||| ||| |||||||| ||||||||||||||||||||||||||| | |||| Sbjct 391 GACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTGCATTCTCACTCGTGTGGCGTCCA 450 Query 144 CCACACAGTCACCCGGCAGCTTCACCACTGACACGACGCTCCCCTACCC----------- 192 | | | || | || ||||||| ||||||||||| |||||| Sbjct 451 CGGCTGGATTACTCCGCCGCTTCACTCGCCACACGACGCTCTCCTACCACTCCGCACGAC 510 Query 193 --AACCACACAGG-TTGCC---------------ACAGCTTCGGCGGATAACTTAAGCCC 234 |||||| ||| ||| | ||| ||||||||| ||| ||||| Sbjct 511 TGAACCACGAAGGCTTGTCTAACATGCGAAATCTACAACTTCGGCGGTGTGCTTGAGCCC 570 Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 571 CGTTACATTGTCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGGT 630 Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 631 GGCTGCTTCTAAGCCAACCTCCTGGTTGTCTATGCAACTCCACATCCTTTCCCACTTAG- 689 Query 355 CAC-CACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| | |||||||||||||| || | |||||| ||||||||||||| Sbjct 690 CACACGCTTAGGGGCCTTAGTTGGTAGTCTGGGTTGTTTCCCTCTCG 736 >seq29733 Length=2375 Score = 316 bits (350), Expect = 5e-84 Identities = 327/440 (74%), Gaps = 40/440 (9%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| |||||||||||| |||| || | | || || Sbjct 2079 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTCACCCTGGGCGGATTAGCCTGGCC 2020 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||||||||| | ||||||| | ||| ||| | ||||||||||||||| Sbjct 2019 CAGGAACCCTTGATCATTCGGCGGCGAAGTTTCTCACTTCGCTTTCGCTACTCATGCCTG 1960 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 ||||||||||| || ||||||||| |||| | | ||||| | || ||| Sbjct 1959 CATTCTCACTCCCACACCCTCCACCACTGGATCACTCCGTGGCTTCCCTGGATGCAGGAC 1900 Query 181 GCTCCCCTACCCAACCACACAGGTTGCCA------------------------------- 209 ||||||||||||| ||||||| | |||| Sbjct 1899 GCTCCCCTACCCACCCACACACCTAGCCAACCACCCGCAGGCGGAAGACAGGACATTATG 1840 Query 210 ---------CAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACT 260 | |||||||||| |||| |||||||||||||| ||||||| | |||||| Sbjct 1839 TGAGTGCCGCGGCTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCAGGATCACT 1780 Query 261 TGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGT 320 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct 1779 TGACCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGT 1720 Query 321 TGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGA 380 ||||| ||| || ||||||||||| ||||| ||| | ||||||||||||||| | || Sbjct 1719 TGTCTTCGCGACCCCACATCCTTTTCCACTTAGTACACGCTTAGGGGCCTTAGCCGGCGA 1660 Query 381 TCTGGGCTGTTTCCCTCTCG 400 |||||||||||||||||||| Sbjct 1659 TCTGGGCTGTTTCCCTCTCG 1640 >seq40447 Length=4142 Score = 205 bits (226), Expect = 2e-50 Identities = 294/412 (71%), Gaps = 23/412 (6%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||| || |||| |||| |||||| ||| ||||||| | || || | | | | Sbjct 1814 CGACTACCCCCTTCGGGCTCGTCTTAGGGGCCGGCTCACCCTGCGCGGATTAGCCTTGCG 1873 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 | ||||||||||| |||||| ||| || ||||| | ||||||||||| || Sbjct 1874 CAGGAACCCTTGGTCTTTCGGCGAGAGGGCATCTCACCCTCTTTATCGCTACTCATGTCT 1933 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACG 178 |||||| |||| | | |||||| || || | ||| | ||||||| || || Sbjct 1934 GCATTCGCACTTCCGATACCTCCACGACCCATT-ACCAGATCGCTTCACAGGCTTACGGA 1992 Query 179 ACGCTCCCCTACCC---------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTA 229 ||||||| ||||| | |||||| || |||||||| | || |||| Sbjct 1993 ACGCTCCGCTACCGCGTGGATAAATCCACAC------CCTAAGCTTCGGTGTATCACTTG 2046 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTG-----ACCAGTGAGCTATTACGCACTC 284 ||||||| ||||| ||| ||| | | | |||| ||||||||||| |||||| || Sbjct 2047 AGCCCCGTTACATCTTCGCCGCAGGACCCCTTGTTTAGACCAGTGAGCTGTTACGCTTTC 2106 Query 285 TTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTT 344 ||| ||||||||||||||| ||||||||||||||||||| | | | |||||| |||| Sbjct 2107 TTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGGAGTCCCACATGCTTT 2166 Query 345 CCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 |||||| || || | || ||||||||||||| | || ||||||||||||| Sbjct 2167 CCCACTTAGATACGATTTGGGGGCCTTAGCTGTAGGTCAGGGCTGTTTCCCT 2218 >seq40460 Length=252 Score = 154 bits (170), Expect = 3e-35 Identities = 117/138 (85%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 262 GACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321 |||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||||| Sbjct 249 GACCAGTGAGCTGTTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTT 190 Query 322 GTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGAT 381 || | | | ||||||||||||||||| || ||| | || ||||||||||||| || | Sbjct 189 GTTTTGGGATTCCCACATCCTTTCCCACTTAGCCACGAATTGGGGGCCTTAGCTGTTGGT 130 Query 382 CTGGGCTGTTTCCCTCTC 399 | ||| |||||||||||| Sbjct 129 CAGGGTTGTTTCCCTCTC 112 >seq40448 Length=2356 Score = 89.7 bits (98), Expect = 1e-15 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 334 CCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTC 393 ||||||||||||||||| || ||| | |||||||||||||||| | ||||||||||||| Sbjct 914 CCACATCCTTTCCCACTTAGCCACGATTTAGGGGCCTTAGCTGGCGGTCTGGGCTGTTTC 973 Query 394 CCTCTCG 400 ||||||| Sbjct 974 CCTCTCG 980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174337070592