Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq139702 147 2e-33 seq97727 136 3e-30 seq64689 134 1e-29 seq97708 129 5e-28 seq130727 125 6e-27 >seq139702 Length=555 Score = 147 bits (162), Expect = 2e-33 Identities = 131/162 (81%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGG-GATTAGCTCCCCCTCGC 59 |||||||||||| |||||||| ||| || || || ||| ||||||||| ||||||| Sbjct 100 TCGAGTTGCAGAGAACAATCCGAACT--GAGACGGCTTTTGGAGATTAGCTCACCCTCGC 157 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | | | || |||| |||| |||||||| ||||||| ||||| | | |||||||| Sbjct 158 GTGCTTGCTGCCCACTGTCACCGCCATTGTAGCACGTGTGTAGCCCAGCGCGTAAGGGCC 217 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||||||||||||||||||||||||||| || |||| Sbjct 218 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGCTTATCAC 259 >seq97727 Length=516 Score = 136 bits (150), Expect = 3e-30 Identities = 130/163 (80%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGG-ATTAGCTCCCCCTCGC 59 |||||||||||| | ||||| | ||| || || ||| |||| ||| |||| |||||| Sbjct 160 TCGAGTTGCAGAGTGCAATCTGAACT--GAGACGGTTTTTGGGGATTTGCTCGACCTCGC 217 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 || || ||| ||| |||| |||||||| ||||||| ||||| ||| |||||||| Sbjct 218 GGTTTCGCGTCCCACTGTCACCGCCATTGTAGCACGTGTGTAGCCCATCCCGTAAGGGCC 277 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTGTCAC 161 |||||||||||||||||||| |||||||||| ||| || |||| Sbjct 278 ATGAGGACTTGACGTCATCCACACCTTCCTCGCGGCTTATCAC 320 >seq64689 Length=1551 Score = 134 bits (148), Expect = 1e-29 Identities = 121/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| ||||||| ||| || |||| ||||||| ||||| |||| || Sbjct 282 TCGAGTTGCAGACCCCAATCCGAACTGAGACCGGCTTTTTGGGATTCGCTCCACCTCACG 223 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || ||||| |||| |||||||| | ||||||||||| | |||||||| || Sbjct 222 GTATCGCAGCCCTTTGTACCGGCCATTGTAGCATGTGTGAAGCCCAAGACATAAGGGGCA 163 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 ||| || ||||||||||||||||||||||||| Sbjct 162 TGATGATTTGACGTCATCCCCACCTTCCTCCG 131 >seq97708 Length=2017 Score = 129 bits (142), Expect = 5e-28 Identities = 127/162 (78%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACA-CTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| | ||||||| ||| || || |||| | ||| |||| | |||| Sbjct 1105 TCGAGTTGCAGAGTGCAATCCGAACT--GAGACGGCTTTTAGAGATCGGCTCGGCATCGC 1162 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | |||| ||| |||| |||||||| ||||||| ||||| |||||||||| Sbjct 1163 TGCCTGGCTTCCCACTGTCACCGCCATTGTAGCACGTGTGTAGCCCAGGACATAAGGGCC 1222 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||||||||||||||||||||||||||| ||||||| Sbjct 1223 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGCTTGTCAC 1264 >seq130727 Length=225 Score = 125 bits (138), Expect = 6e-27 Identities = 127/162 (78%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACA-CTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||| | ||||||| ||| || || |||| |||||| ||||| |||| Sbjct 1 CGAGTTGCAGAGTGCAATCCGAACT--GAGACGGCTTTTGGGGATTTGCTCCAGATCGCT 58 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || ||| ||| |||| |||||||| ||||||| ||||| ||| ||||||||| Sbjct 59 CCTTCGCGTCCCACTGTCACCGCCATTGTAGCACGTGTGTAGCCCATCCCGTAAGGGCCA 118 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTGTCAC 161 ||||||||||||||||||| |||||||||| ||| || |||| Sbjct 119 TGAGGACTTGACGTCATCCACACCTTCCTCGCGGCTTATCAC 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414883355510