Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq74834 248 1e-63 seq181636 239 7e-61 seq97708 226 5e-57 seq110065 217 2e-54 seq213393 192 1e-46 seq192604 174 3e-41 seq143019 174 3e-41 >seq74834 Length=1907 Score = 248 bits (274), Expect = 1e-63 Identities = 229/290 (79%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| |||||||||||||||| | |||| ||| |||||||||| ||||| Sbjct 20 CCCATGCTTTCGCTCCTCAGCGTCAGTTACGGCCCAGAGATCTGCCTTCGCCATCGGTGT 79 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||||| |||||| ||||||||||| |||||||| || || || | |||| Sbjct 80 TCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGAATTCCAATCTCCCCTACCGCAC 139 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | || | | ||||||| ||||||||| ||||||||| | ||| Sbjct 140 TCTAGTCTGCCCGTACCCACTGCAGGCCCGAGGTTGAGCCTCGGGTTTTCACAGCCGACG 199 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||||| || |||||| |||||||| |||||| ||||||||| |||||| Sbjct 200 CGACAAACCGCCTACGAGCTCTTTACGCCCAATAATTCCGGACAACGCTTGCACCCTACG 259 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct 260 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTTTTCTGCAGGTA 309 >seq181636 Length=993 Score = 239 bits (264), Expect = 7e-61 Identities = 229/291 (79%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | |||||| | ||||||||||||||||||| Sbjct 214 CCCACGCTTTCGCACCTCAGCGTCAGTAATGGTCCAGTCAGCCGCCTTCGCCACTGGTGT 273 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || | || ||||||||| |||||||| |||||| || | |||| | ||||| | || Sbjct 274 TCTTGCGAATATCTACGAATTTCACCTCTACACTCGCAGTTCCACTGACCTCTACCATAC 333 Query 121 TCAAGAAAAACAGTTTCAAATGC-AGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| ||||||| || || || | || | ||||||||| | |||||| | ||| Sbjct 334 TCAAGCCAAACAGTATCGAAGGCAATTCTGT-GGTTGAGCCACAGGCTTTCACCCCCGAC 392 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || |||||||| |||||||||| |||| | | |||| |||||| ||| ||| | Sbjct 393 TTAAAACGCCGCCTACGCGCCCTTTACGCCCAGTGATTCCGAGCAACGCTAGCCCCCTTC 452 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||||||| ||||||||| ||||||||| || |||| Sbjct 453 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTATTCTTCCGGTA 503 >seq97708 Length=2017 Score = 226 bits (250), Expect = 5e-57 Identities = 224/290 (77%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| Sbjct 1656 CCCACGCTTTCGCGCCTCAGCGTCAGTAATGAACCAGGTCGCCGCCTTCGCCACCGGTGT 1715 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| ||||| ||| Sbjct 1716 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCACGACCCTCTTTCACAC 1775 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 ||||| || |||||||||| | |||| |||||| |||||||||||||| Sbjct 1776 TCAAGCCTGGACGTATCAAATGCAGCCCCCAGGTTAAGCCCAGGAATTTCACATCTGACT 1835 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 || |||||||| |||||||||| |||| | | |||| |||||| ||| ||| || Sbjct 1836 GTCCAAACCGCCTACGCGCCCTTTACGCCCAGTCATTCCGAGCAACGCTAGCCCCCTTCG 1895 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| ||||| ||| | |||| Sbjct 1896 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTCTGCGGGTA 1945 >seq110065 Length=950 Score = 217 bits (240), Expect = 2e-54 Identities = 222/290 (77%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||||||| |||| | ||||||||||||| ||||| Sbjct 300 CCCACGCTTTCGCTCCTCAGCGTCAGTTACTACCCAGAGACCCGCCTTCGCCACCGGTGT 359 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||||| |||||||||||||||||| |||||||| | || || || || Sbjct 360 TCCTCCTGATATCTGCGCATTTCACCGCTACACCAGGAATTCCAGTCTCCCCTGTAGTAC 419 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 ||||| | || || ||| ||| ||| ||| || |||||| ||| Sbjct 420 TCAAGTCTGCCCGTATCGCCCGCACGCTTGACGTTAAGCATCAAGATTTCACGAACGACG 479 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||||| || |||||| |||| ||| |||||| |||||| || |||||| Sbjct 480 CGACAAACCGCCTACGAGCTCTTTACGCCCAGTAATTCCGGACAACGCTCGCACCCTACG 539 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||||||||||| |||| |||| ||| |||||| Sbjct 540 TATTACCGCGGCTGCTGGCACGTAGTTGGCCGGTGCTTCTTCTCCAGGTA 589 >seq213393 Length=301 Score = 192 bits (212), Expect = 1e-46 Identities = 208/274 (76%), Gaps = 4/274 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| |||||| |||||| | |||| | |||||||||| ||| | Sbjct 273 CCCATGCTTTCGCACCTCAGTGTCAGTATTAGGCCAGATGGCTGCCTTCGCCATCGGTAT 214 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTC--CGATTGCCTCTCCAGC 118 |||||| || |||||||||||||||||||||| ||||||| | || ||||||| Sbjct 213 TCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTCTACCAT--CCTCTCCCAT 156 Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGA 178 |||| || || |||| || |||||| ||| ||| | | |||||||||||| Sbjct 155 ACTCTAGCTAACCAGTATCGAATGCAATTCCCAAGTTAAGCTCGGGGATTTCACATCTGA 96 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 ||| | || ||||| ||| |||||| |||| ||| |||| |||||||||| ||| Sbjct 95 CTTAATTAGCCACCTACGCGCGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTC 36 Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCG 272 |||||||||||||||||||||||| ||||||||| Sbjct 35 CGTATTACCGCGGCTGCTGGCACGGAGTTAGCCG 2 >seq192604 Length=994 Score = 174 bits (192), Expect = 3e-41 Identities = 212/284 (75%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCC-AGCAATCCGCCTTCGCCACTGGTG 59 |||||||||||| | ||||||||||| | | | || | | |||||||| | ||||| Sbjct 275 CCCACGCTTTCGTCCATCAGCGTCAGT-ATAGACATAGTGACCTGCCTTCGCAATTGGTG 333 Query 60 TTCCTCCGTA-TATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC 118 ||| | ||| |||||| ||||||||||||||||| ||||| | ||| | Sbjct 334 TTC-TAAGTAATATCTATGCATTTCACCGCTACACTACTTATTCCAGCCACTTCTACCTA 392 Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGA 178 |||||||| ||||||||| |||| | ||| ||| || |||||| |||| Sbjct 393 ACTCAAGACCTGCAGTTTCAATGGCAGTTTCATAGTTAAGCTATGAGATTTCACCACTGA 452 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 ||| | ||||||||| ||||||| ||||| |||||||| |||||||| || ||| Sbjct 453 CTTACAAGCCCGCCTACGGACCCTTTAAACCCAGTAAATCCGAATAACGCTAGCACCCTC 512 Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct 513 CGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGAGCTTATTC 556 >seq143019 Length=458 Score = 174 bits (192), Expect = 3e-41 Identities = 186/246 (76%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| || | |||| | | |||||||||| ||||| Sbjct 213 CCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAGAACTGCCTTCGCCATCGGTGT 272 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||||| |||||| ||||||||||| |||||||| | || || | |||| Sbjct 273 TCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGAATTCCATTCTCCCCTACCGCAC 332 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | || | | ||||| | ||||||||| | ||||||| | ||| Sbjct 333 TCTAGCTGGCCCGTACCCACTGCAGACCCGAGGTTGAGCCTCGGGATTTCACAGCAGACG 392 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||||| || |||||| |||||||| ||||||||||||||| || |||| Sbjct 393 CGACCAACCGCCTACGAGCTCTTTACGCCCAATAATTCCGGATAACGCTTGTAACATACG 452 Query 241 TATTAC 246 |||||| Sbjct 453 TATTAC 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 826575300593