Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq144823 250 4e-64 seq40447 224 2e-56 seq121781 185 1e-44 seq121782 176 7e-42 seq128169 120 5e-25 seq215502 111 2e-22 >seq144823 Length=480 Score = 250 bits (276), Expect = 4e-64 Identities = 191/226 (85%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| | | |||| |||| |||| ||||| |||||| ||||||||| ||||| | ||| Sbjct 255 GAGGCGAGTTTCGCACTTATATGCTTTCAGTGCTTATCTCTTCCAAACGTAGCTACTCAG 314 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | ||||| |||| ||||||||| | |||||||||||||| || |||||||||||||| Sbjct 315 CGGTGCACCTGGCGGTACAACTGATACACCAGAGGTTTGTTCAATTCGGTCCTCTCGTAC 374 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || |||| |||||||||| ||| |||||||| || |||||||||||||||||||| | Sbjct 375 TAGAGACAAATCCTCTCAAACATCCAACGCCCACAACAGATAGGGACCGAACTGTCTCAC 434 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCC 227 |||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 435 GACGTTCTGAACCCAGCTCGCGTGCCACTTTAATCGGCGAACAGCC 480 >seq40447 Length=4142 Score = 224 bits (248), Expect = 2e-56 Identities = 156/176 (89%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 100 GTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACG 159 || || |||||||||||||||||| || || ||||||||||||||| ||||||||| | Sbjct 667 GTTCAACCCGGTCCTCTCGTACTAGGGTCAACTCCTCTCAAATTTCG-ACGCCCACGGCA 725 Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||| ||||||||| |||||||||||||||||||| ||| || ||||||| ||| Sbjct 726 GATAGGGACCAAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCACTTTAATCGGC 785 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||| |||||||||||||| || ||||||||||||| || |||||||||||| Sbjct 786 GAACAGCCAAACCCTTGGGACCTGCTCCAGCCCCAGGATGTGATGAGCCGACATCG 841 >seq121781 Length=909 Score = 185 bits (204), Expect = 1e-44 Identities = 144/172 (84%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 8 GGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGC 67 |||||| |||||||||| |||||| |||||| |||| ||| ||||| |||| ||| Sbjct 738 GGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCGTTCCGAACGTAGCTAATCAGCGGTGC 797 Query 68 ACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGA 127 | |||| | ||||||| ||||||||||| |||||||||||||||||||||||| ||| Sbjct 798 TCCTGGCGGAACAACTGACACACCAGAGGTTCGTCCATCCCGGTCCTCTCGTACTAGGGA 857 Query 128 CAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTC 179 ||| || |||||||| |||||||| | || |||||||||||||||||||||| Sbjct 858 CAGATCTTCTCAAATCTCCTACGCGCGCGGCGGATAGGGACCGAACTGTCTC 909 >seq121782 Length=912 Score = 176 bits (194), Expect = 7e-42 Identities = 105/110 (95%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 166 GACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAG 225 |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1 GACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAG 60 Query 226 CCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 61 CCCAACCCTTGGGACCTACTCCAGCCCCAGGATGCGACGAGCCGACATCG 110 >seq128169 Length=614 Score = 120 bits (132), Expect = 5e-25 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 8 GGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGC 67 |||||| |||||||||| |||||| ||||||||||| ||| ||||| ||||| ||| Sbjct 499 GGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCGAACGTAGCTAACCAGCCGTGC 558 Query 68 ACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA 123 | ||| | |||||||| ||||||||||| |||| ||||||||||||||||||| Sbjct 559 TCCTGGTGGAACAACTGGCACACCAGAGGTTCGTCCGTCCCGGTCCTCTCGTACTA 614 >seq215502 Length=451 Score = 111 bits (122), Expect = 2e-22 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| ||||||||||||||||| ||||||| ||| || ||||| ||| | Sbjct 331 GAGGTGGGTTTCCCGCTTAGATGCCTTCAGCGGTTATCCCGTCCGTACGTAGCTACCCTG 390 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 || ||| |||| ||||| ||| |||||||||| || ||||||||||||||||||| Sbjct 391 CTGTGCCGCTGGCGCGACAACAGGTACACCAGAGGTACGTTCATCCCGGTCCTCTCGTAC 450 Query 122 T 122 | Sbjct 451 T 451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 778704144188