Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq168796 104 4e-20 seq184311 95.1 2e-17 seq67817 95.1 2e-17 >seq168796 Length=1323 Score = 104 bits (114), Expect = 4e-20 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 138 CTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTC 197 ||||||||| || || || |||| |||||||| |||||||||||||| ||| | | ||| Sbjct 255 CTTCATGCGCTTCTTGCCCTCCTTCTGCTTCTCGAGCAGCTTGCGCTTGCGGGTGATGTC 314 Query 198 ACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAAT 257 ||||||||||| |||||||| |||| || | | || || || || || || Sbjct 315 GCCGCCGTAGCACTTGGCCAGAACGTCTTTGCGCATCGCGCGGATCGATTCGCGGGCGAT 374 Query 258 GATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 ||| || |||| || ||||||||||||| || ||| Sbjct 375 GATGCGCGCGCCGATCGCGGCCTGGATCGGCACCTCG 411 >seq184311 Length=1266 Score = 95.1 bits (104), Expect = 2e-17 Identities = 142/198 (72%), Gaps = 9/198 (5%) Strand=Plus/Minus Query 101 GAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCT 160 |||||| || | | || | |||||| ||| || |||||| || || || || ||| Sbjct 350 GAAGGCCTCCTGG-GGTACTTCCACCCGGCCGACCATCTTCATCCGCTTCTTGCCCTCCT 292 Query 161 TTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTA 220 | |||||||| |||||||||||||| ||| | | ||| ||||||||||| ||||| || | Sbjct 291 TCTGCTTCTCCAGCAGCTTGCGCTTGCGGGTGATGTCGCCGCCGTAGCACTTGGCGAGCA 232 Query 221 CGTTCTTTCTGAGAGCCTTGACGGA-GGTC---CGCGCAATGATCTGCCCGCCAATGGCG 276 ||| ||| | || || |||| ||| ||||| |||| | |||| || || Sbjct 231 CGTCCTTGCGGATCGC----GCGGATCGTCTCGCGCGCGATGACGCGGGCGCCGATCGCC 176 Query 277 GCCTGGATCGCGACGTCG 294 |||||||||| || ||| Sbjct 175 GCCTGGATCGGCACCTCG 158 >seq67817 Length=6531 Score = 95.1 bits (104), Expect = 2e-17 Identities = 98/128 (77%), Gaps = 8/128 (6%) Strand=Plus/Plus Query 139 TTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCA 198 |||||||| || || || |||| |||||||| |||||||||||||| ||||| | ||| Sbjct 5026 TTCATGCGCTTCTTGCCCTCCTTCTGCTTCTCGAGCAGCTTGCGCTTGCGGCTGATGTCG 5085 Query 199 CCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGT----CCGCGC 254 ||||||||||| || || || |||| ||| | || ||| |||| || ||||| Sbjct 5086 CCGCCGTAGCACTTCGCGAGCACGTCCTTGCGGATCGCC----CGGATGTTCTCGCGCGC 5141 Query 255 AATGATCT 262 |||||||| Sbjct 5142 AATGATCT 5149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 839340942301