Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq133788 84.2 5e-14 seq254369 77.0 7e-12 seq109408 77.0 7e-12 >seq133788 Length=2147 Score = 84.2 bits (92), Expect = 5e-14 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 253 CCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAG 312 |||||||||||||| || ||||| ||||| ||||||||||||||| ||| ||| ||| Sbjct 535 CCAGGTGTCCTTGGACCCGCCGCCCTGCGAGGAGTTGACGACCAGCTCGCCCTCCGGCAG 594 Query 313 CGCCACGCGGGTCAAGCCACCGGGCACCA 341 ||| || ||||||| || || |||| || Sbjct 595 CGCGACCCGGGTCAGCCCGCCCGGCAGCA 623 >seq254369 Length=385 Score = 77.0 bits (84), Expect = 7e-12 Identities = 66/82 (80%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 258 TGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCA 317 ||||||| || || ||||| || || ||||| |||||||| |||||||| ||||||| Sbjct 261 TGTCCTTCGTCCCGCCGCCCTGGCTGGAATTGACCACCAGCGATCCTTCCTTGAGCGCCA 320 Query 318 CGCGGGTCAAGCCACCGGGCAC 339 ||||||| | ||| ||||| || Sbjct 321 CGCGGGTGAGGCCGCCGGGAAC 342 >seq109408 Length=6669 Score = 77.0 bits (84), Expect = 7e-12 Identities = 72/92 (78%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 250 CACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTT 309 ||||||||||||||| | || ||||| ||||||||||| || ||||| || || || Sbjct 1748 CACCCAGGTGTCCTTCGACCCGCCGCCCTGCGACGAGTTCACCACCAGGGACCCCTCGGG 1689 Query 310 CAGCGCCACGCGGGTCAAGCCACCGGGCACCA 341 |||||| || || |||| || ||||||| || Sbjct 1688 CAGCGCGACACGTGTCAGTCCGCCGGGCAGCA 1657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1116896670400