Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq274619 109 1e-21 seq121772 105 1e-20 >seq274619 Length=332 Score = 109 bits (120), Expect = 1e-21 Identities = 190/270 (70%), Gaps = 16/270 (6%) Strand=Plus/Minus Query 49 TTCACCGTGGTTGCCCT-CGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCAT 107 ||||||||| ||||| | ||| ||| || |||||||| |||||||||| || | || Sbjct 327 TTCACCGTGATTGCCGTGCGGACCGGTT-AGCCCGAACAGACGCTCCTTGAGAATACGAT 269 Query 108 C-GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTT---GTCACTGAAC 163 | |||| ||||||||| || || ||| || |||||| |||| | || Sbjct 268 CAGCGC-CGTTCCACATCGCGAGCGACAGACAGA------GCGCCTGAGAGTCATCGCAC 216 Query 164 ---CCCGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGG 220 || || | |||||||| |||||||| || || || ||| ||||| || || | Sbjct 215 AGTCCGGCGATCCCGTCCTCACCCCAACGATATGCCCGTGAGCGCGCATGTTCGTGCGAA 156 Query 221 AAGTAGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGT 280 | | | ||| |||||||||| || || || |||||||| ||||||||||| ||| Sbjct 155 ACGAAATTCCACGCGTCGCCATACTCGGAATAATCCTCGCGCACGGTGCCCCATTGCCGT 96 Query 281 TCGCTCAGGTAGGGGCCCCACTCGCGCCAG 310 ||| ||||| ||||||||| ||||||| Sbjct 95 TCGGCAAGGTAAGGGCCCCACAGGCGCCAG 66 >seq121772 Length=1443 Score = 105 bits (116), Expect = 1e-20 Identities = 177/254 (70%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 ||||| || || || || | ||| || || |||||||||||||| | || ||| Sbjct 1213 TCACCATGATTCCCATCCGGGTTCGCAAGCCCAAACAGGCGCTCCTTCAGGAACGGATCC 1154 Query 110 CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCC--TTGTCACTGAACCCCG 167 |||||||||| || || || | || ||| ||| || || || | ||| Sbjct 1153 TGCTCGTTCCATAGCGCGAG--CGAGAATGCAAGCCTGCAGTGATTATCGCTCAGCCCGC 1096 Query 168 CCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGG 227 | | || ||||||||||| ||||| ||||| |||||| || || ||| Sbjct 1095 CGATTCCATCCTCGCCCCATCGGTACGCGCGCGAGCGTGCTTGCCCAAAATCGAACGCTT 1036 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCA 287 |||| ||||| ||||||||| |||||||||||||||||| ||||| || || ||||||| Sbjct 1035 CCCATGCGTCACCATCGGCGGAGTAGTCTTCGCGCACCGTCCCCCACTGCCGCTCGCTCA 976 Query 288 GGTAGGGGCCCCAC 301 | || || |||||| Sbjct 975 GATACGGTCCCCAC 962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1005207003360