Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq74834 242 9e-62 seq110065 239 1e-60 seq220586 168 2e-39 seq220587 136 1e-29 seq130999 136 1e-29 seq246058 98.7 2e-18 seq192604 96.9 8e-18 seq181636 87.8 4e-15 seq138216 80.6 6e-13 >seq74834 Length=1907 Score = 242 bits (268), Expect = 9e-62 Identities = 312/423 (74%), Gaps = 28/423 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||||||||||||| || || |||||||| | |||||||||||||| |||||||| Sbjct 343 TTTACAACCCGAAGGCCGTCATCCCTCACGCGGCGTTGCTGCATCAGGCTTTCGCCCATT 402 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 403 GTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 462 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| ||||| |||||||| || |||| |||| | || |||| ||||||||| | ||| Sbjct 463 GGCCGGTCACCCTCTCAGGCCGGCTACCCGTCGTAGGCTTGGTGAGCCATTACCTCACCA 522 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAA---GGTCCCCCTCTT 241 || | || || | || ||||| ||| || || ||| ||| Sbjct 523 ACAACCTGATAGGCCGCGAGTCCATCC----TTGA----CCAAAATTCTTTCCAACTC-C 573 Query 242 TGGTCTTGCGAC-------GTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCC--C 292 | | | |||| | ||| ||||||||| | |||||||| | ||||||| Sbjct 574 TAGCCATGCGGCTGAAGCTCGTATCCGGTATTAGACGTCGTTTCCAACGCTTATCCCAGA 633 Query 293 CTCCATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGC 351 || | |||| ||| | || |||||||||||| ||||||| || | || ||| Sbjct 634 GTCAA--GGGCAGGTTACTCACGTGTTACTCACCCGTTCGCCACTGATC--CAGAGGAGC 689 Query 352 AAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCT 411 ||||| | || | |||||||||||||||||||||| || |||||||||||||| || Sbjct 690 AAGCTCC--CCCTTCACCGTTCGACTTGCATGTGTTAAGCACGCCGCCAGCGTTCATCCT 747 Query 412 GAG 414 ||| Sbjct 748 GAG 750 >seq110065 Length=950 Score = 239 bits (264), Expect = 1e-60 Identities = 167/190 (88%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||||||||||||| || || |||||||| | ||||||||||||||||||||||| Sbjct 623 TTTACAACCCGAAGGCCGTCATCCCTCACGCGGCGTCGCTGCATCAGGCTTGCGCCCATT 682 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 683 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 742 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| |||| |||||||| || |||| ||||||||| ||| |||||||||||| ||| Sbjct 743 GGCCGGTCGCCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTAGGCCATTACCCCACCA 802 Query 185 ACTAGCTAAT 194 || |||| || Sbjct 803 ACAAGCTGAT 812 >seq220586 Length=203 Score = 168 bits (186), Expect = 2e-39 Identities = 111/123 (90%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||||||||||||| || || |||||||| | ||||| |||||||| |||||||| Sbjct 80 TTTACAACCCGAAGGCCGTCATCCCTCACGCGGCGTCGCTGCGTCAGGCTTTCGCCCATT 139 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 140 GCGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 199 Query 125 GGC 127 ||| Sbjct 200 GGC 202 >seq220587 Length=472 Score = 136 bits (150), Expect = 1e-29 Identities = 196/277 (71%), Gaps = 32/277 (12%) Strand=Plus/Minus Query 138 CTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCC 197 ||||||||||||| ||||||||| || |||| ||| ||||| | ||||||| ||||||| Sbjct 472 CTCAGACCAGCTAAGGATCGTCGGCTTGGTGCGCCTTTACCACACCAACTACCTAATCCT 413 Query 198 ATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTA 257 | ||| |||||| | || | || ||||||| ||| || | | | Sbjct 412 ACGCGGGCTCATCCCTCGGCGATA------AA--------TCTTTGGACTTACGTCATCA 367 Query 258 TGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACAT 317 | |||||||||| |||||||| ||||| || ||| ||||| |||||| | | Sbjct 366 TCCGGTATTAGCAGTCGTTTCCAACTGTTATTCCGAACCAAGGGGCAGATTCCCACGCGT 307 Query 318 TACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACT 377 ||| ||||||| ||||||| | || | |||| |||| |||||||| Sbjct 306 TACGCACCCGTGCGCCACTA-------AGGCCG-AAGC--CTTC--------GTTCGACT 265 Query 378 TGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||| ||||||||||||||| |||||| Sbjct 264 TGCATGTGTTAGGCATGCCGCCAGCGTTCATTCTGAG 228 >seq130999 Length=701 Score = 136 bits (150), Expect = 1e-29 Identities = 195/277 (70%), Gaps = 32/277 (12%) Strand=Plus/Plus Query 138 CTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCC 197 ||||||||||||| |||||||||||| |||| || ||||| | ||||||||||||||| Sbjct 1 CTCAGACCAGCTAAGGATCGTCGCCTTGGTGCGCTCTTACCACACCAACTAGCTAATCCT 60 Query 198 ATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTA 257 | ||| |||||| | | || | || ||||||| ||| || | | | Sbjct 61 ACGCGGGCTCATCCTCTGGCGATA------AA--------TCTTTGGACTTACGTCATCA 106 Query 258 TGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACAT 317 | |||||||||| |||||||| ||||| || ||| ||||| |||||| | | Sbjct 107 TCCGGTATTAGCAGTCGTTTCCAACTGTTATTCCGAACCAAAGGGCAGATTCCCACGCGT 166 Query 318 TACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACT 377 ||| ||||||| ||||||| | |||| ||| | ||||||||| Sbjct 167 TACGCACCCGTGCGCCACT-ATGCCCGAA--AGC---------------ATCGTTCGACT 208 Query 378 TGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||| |||||||||||||| |||||| Sbjct 209 TGCATGTGTTAGGCATGCCGCCAGCGTTCGTTCTGAG 245 >seq246058 Length=368 Score = 98.7 bits (108), Expect = 2e-18 Identities = 194/287 (68%), Gaps = 30/287 (10%) Strand=Plus/Plus Query 128 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACT 187 || |||||||||||||||||||| ||||||||||| ||| |||| ||||||| |||||| Sbjct 1 TGATCATCCTCTCAGACCAGCTACTGATCGTCGCCTTGGTAGGCCGTTACCCCACCAACT 60 Query 188 AGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCT 247 |||||||| | ||| |||| | | || || | |||| | Sbjct 61 AGCTAATCAGACGCGGGCCGATCC-TTCGGCAGTAAACC----TTTCCCCAAAAGG---- 111 Query 248 TGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTT 307 ||| ||| |||||||||| |||||||| ||||| || ||| || | | Sbjct 112 -GCG----TATCCGGTATTAGCGCACGTTTCCATGCGTTATTCCGAACCAAAGGGTACGT 166 Query 308 TCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTA 367 ||||| ||||||||||||| ||| || || | ||| ||| Sbjct 167 TCCCACGTGTTACTCACCCGTCTGCCGCT-------GACACCCGAAGGTGC--------- 210 Query 368 CCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||| ||||||||||||||||| ||||||||||||||||| |||||| Sbjct 211 CCGCTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTCGCTCTGAG 257 >seq192604 Length=994 Score = 96.9 bits (106), Expect = 8e-18 Identities = 82/100 (82%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||| || || || || || | ||||||| ||||||| ||||||| ||||| Sbjct 612 TTTACAATCCATAGAACCGTCGTCCTTCACGCGGGATGGCTGGATCAGGCGCTAACCCAT 671 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 103 ||| ||||||||| |||||||||||||||||||||||||| Sbjct 672 TGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGG 711 >seq181636 Length=993 Score = 87.8 bits (96), Expect = 4e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||| Sbjct 531 CTTTACAACCCTAAGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGCTTGCGCCCAT 590 Query 64 T 64 | Sbjct 591 T 591 >seq138216 Length=221 Score = 80.6 bits (88), Expect = 6e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 113 CAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCC 172 |||| |||||||||| |||| |||||||| || |||| ||||||||| ||| |||| Sbjct 1 CAGTCCCAGTGTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTAGGCC 60 Query 173 ATTACCCCGCCAACTAGCTAAT 194 |||||||| ||||| |||| || Sbjct 61 ATTACCCCACCAACAAGCTGAT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1219012937408