Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq74834 398 2e-108 seq110065 381 2e-103 seq181636 223 1e-55 seq220586 217 4e-54 seq97708 194 5e-47 seq192604 158 4e-36 seq213393 120 9e-25 seq246058 111 5e-22 seq138216 102 2e-19 seq242504 84.2 7e-14 >seq74834 Length=1907 Score = 398 bits (440), Expect = 2e-108 Identities = 377/476 (79%), Gaps = 9/476 (2%) Strand=Plus/Minus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 || |||| ||||||||||||| |||| |||||||||||| || | |||||| | Sbjct 676 AGTGGCGAACGGGTGAGTAACACGTGAGTAACCTGCCCTTGACTCTGGGATAAGCGTTGG 617 Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGG-TAGAAGTATCAAAGCTCC 141 ||| | ||||||| |||| | ||| ||||||| ||| ||| |||| Sbjct 616 AAACGACGTCTAATACCGGATACGAG-CTTCAGCCGCATGGCTAGGAGTTGGAAAGAATT 558 Query 142 GGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGG 201 ||| ||||| ||| |||| | || || | |||||| |||||| |||| |||||| Sbjct 557 TT-GGTCAAGGATGGACTCGCGGCCTATCAGGTTGTTGGTGAGGTAATGGCTCACCAAGC 499 Query 202 CGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCA 261 | |||| ||||||| ||||||||||||| |||||||| ||| |||||||||||| ||| Sbjct 498 CTACGACGGGTAGCCGGCCTGAGAGGGTGACCGGCCACACTGGGACTGAGACACGGCCCA 439 Query 262 AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCA 321 |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 438 GACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATGCAGCA 379 Query 322 ACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAA-----GA 376 |||||||||||| ||||| ||||||||||| ||||| |||| | || |||| || Sbjct 378 ACGCCGCGTGAGGGATGACGGCCTTCGGGTTGTAAACCTCTTTTAGCAGGGAAGAAGCGA 319 Query 377 TAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATAC 436 | ||||||||| || || |||| |||||||||||||||||||||||||||||||||| Sbjct 318 AAGTGACGGTACCTGCAGAAAAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATAC 259 Query 437 GTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 |||||| || |||||| |||||||||| | |||||||||| | |||||| ||||| Sbjct 258 GTAGGGTGCAAGCGTTGTCCGGAATTA-TTGGGCGTAAAGAGCTCGTAGGCGGTTT 204 >seq110065 Length=950 Score = 381 bits (422), Expect = 2e-103 Identities = 297/353 (84%), Gaps = 6/353 (2%) Strand=Plus/Minus Query 145 GGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGA 204 ||||| ||| | |||||| | || |||| |||||| ||||| ||| ||||||||||| Sbjct 835 GGTACGAGATGGGCCCGCGGCCTATCAGCTTGTTGGTGGGGTAATGGCCTACCAAGGCGA 776 Query 205 CGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAAC 264 ||| ||||||| |||||||||| || |||||||| ||| |||||||||||| ||| || Sbjct 775 CGACGGGTAGCCGGCCTGAGAGGGCGACCGGCCACACTGGGACTGAGACACGGCCCAGAC 716 Query 265 TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACG 324 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 715 TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCGACG 656 Query 325 CCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGA-----AGATAA 379 ||||||||| ||||| ||||||||||| ||||| |||| || || ||| || | Sbjct 655 CCGCGTGAGGGATGACGGCCTTCGGGTTGTAAACCTCTTTCACCAGGGACGAAGAGTGAT 596 Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439 ||||||||| || || ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 595 TGACGGTACCTGGAGAAGAAGCACCGGCCAACTACGTGCCAGCAGCCGCGGTAATACGTA 536 Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 ||| || |||||| |||||||||||| |||||||||| | |||||| ||||| Sbjct 535 GGGTGCGAGCGTTGTCCGGAATTACT-GGGCGTAAAGAGCTCGTAGGCGGTTT 484 >seq181636 Length=993 Score = 223 bits (246), Expect = 1e-55 Identities = 172/203 (85%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 298 AATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAA 357 ||||||| ||||||||| |||| | |||||||||| |||||||||||| |||| ||||| Sbjct 591 AATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAA 532 Query 358 GCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTG 417 ||||| | || ||| |||||||||||||| || || ||||||||||||||| |||| Sbjct 531 GCTCTTTTATCCGGGACGATAATGACGGTACCGGAAGAATAAGCCCCGGCTAACTTCGTG 472 Query 418 CCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGG 477 |||||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||| Sbjct 471 CCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATCACT-GGGCGTAAAGG 413 Query 478 GTGCGTAGGTGGTTTCTTAAGTC 500 | ||||||| || | ||||||| Sbjct 412 GCGCGTAGGCGGCGTTTTAAGTC 390 >seq220586 Length=203 Score = 217 bits (240), Expect = 4e-54 Identities = 172/203 (85%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 234 GGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATT 293 ||||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 203 GGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATT 144 Query 294 GCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCG 353 || |||||||| ||||||||| ||||| |||||||||||| ||||| ||||||||||| | Sbjct 143 GCGCAATGGGCGAAAGCCTGACGCAGCGACGCCGCGTGAGGGATGACGGCCTTCGGGTTG 84 Query 354 TAAAGCTCTGTC--CTC-AAGGAA--GATAATGACGGTACTTGAGGAGGAAGCCCCGGCT 408 |||| |||| || ||| | ||| | | |||||||| | || ||||| ||||| Sbjct 83 TAAACCTCTTTCAGCTCTGACGAAGCGCAAGTGACGGTAGGAGCAGAAGAAGCACCGGCC 24 Query 409 AACTACGTGCCAGCAGCCGCGGT 431 ||||||||||||||||||||||| Sbjct 23 AACTACGTGCCAGCAGCCGCGGT 1 >seq97708 Length=2017 Score = 194 bits (214), Expect = 5e-47 Identities = 151/179 (84%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 314 ATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGA 373 || |||||| |||||||||| || ||||| |||||| | |||||||||| || | ||| Sbjct 2017 ATCCAGCAATGCCGCGTGAGTGAAGAAGGTCTTCGGATTGTAAAGCTCTTTCGGCGGGGA 1958 Query 374 AGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAA 433 ||| |||||||||| | || |||||||||||||||| |||||||||||||||||||| Sbjct 1957 CGATGATGACGGTACCCGCAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAA 1898 Query 434 TACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 |||| |||||||||||||| |||||| ||| |||||||||||| ||||||| ||||| Sbjct 1897 TACGAAGGGGGCTAGCGTTGCTCGGAATGACT-GGGCGTAAAGGGCGCGTAGGCGGTTT 1840 >seq192604 Length=994 Score = 158 bits (174), Expect = 4e-36 Identities = 193/262 (74%), Gaps = 21/262 (8%) Strand=Plus/Minus Query 259 CCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCA 318 ||| |||||||||||||||||||||| ||||||||| |||||||| | ||||||| || Sbjct 711 CCAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGACAATGGGTTAGCGCCTGATCCA 652 Query 319 GCAACGCCGCGTGAGCGATGAAGGC-CTTCGGGTCGTAAAGCTCTGTCCT-CAAGGA--- 373 || | |||||||| || || || || || | ||||| ||| | | || ||| Sbjct 651 GCCATCCCGCGTGAAGGACGACGGTTCTATGGATTGTAAACTTCTTTTGTACAGGGATAA 592 Query 374 -------------AGATAA--TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGC 418 ||| | ||| |||||| | || |||| |||||||||| ||||| Sbjct 591 ACCTACTCTCGTGAGAGTAGCTGAAGGTACTGTACGAATAAGCTCCGGCTAACTCCGTGC 532 Query 419 CAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGG 478 ||||||||||||||||||| |||| ||||||||||| |||| ||||| ||| ||||||| Sbjct 531 CAGCAGCCGCGGTAATACGGAGGGTGCTAGCGTTATTCGGATTTACT-GGGTTTAAAGGG 473 Query 479 TGCGTAGGTGGTTTCTTAAGTC 500 | |||||| || | |||||| Sbjct 472 TCCGTAGGCGGGCTTGTAAGTC 451 >seq213393 Length=301 Score = 120 bits (132), Expect = 9e-25 Identities = 86/98 (88%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 403 CCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATT 462 |||||||||| |||||||||||||||||||||||| |||| || ||||||| ||||||| Sbjct 1 CCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATT 60 Query 463 ACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| |||||||||| | |||||||||| | ||||||| Sbjct 61 ACT-GGGCGTAAAGCGCGCGTAGGTGGCTAATTAAGTC 97 >seq246058 Length=368 Score = 111 bits (122), Expect = 5e-22 Identities = 75/84 (89%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 150 AGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC 209 ||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 85 AGGATCGGCCCGCGTCTGATTAGCTAGTTGGTGGGGTAACGGCCTACCAAGGCGACGATC 26 Query 210 AGTAGCCGACCTGAGAGGGTGATC 233 |||||| | |||||||| ||||| Sbjct 25 AGTAGCTGGTCTGAGAGGATGATC 2 >seq138216 Length=221 Score = 102 bits (112), Expect = 2e-19 Identities = 161/225 (72%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 28 CGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCGAAAGG 87 || ||||||||||||| |||||| ||||||||| | | ||||||| |||| Sbjct 221 CGAACGGGTGAGTAACACGTGGGCAACCTGCCCCTAGCTCTGGGATAACTCCGGGAAACC 162 Query 88 TATGCTAATACGAGATAATATACTTT-TATCGCATGGTAGAAGTATCAAAGCTC--CGGC 144 ||||||||| |||| | ||||| | |||| || | |||| | |||| Sbjct 161 GGTGCTAATACCGGATAC-ACACTTTCTGAGGCATCTCAGGTGGTGGAAAGTTTTTCGGC 103 Query 145 GGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGA 204 || |||| | |||||| | || |||| |||||| ||||| ||| ||||||||||| Sbjct 102 --TAG-GGATGGGCCCGCGGCCTATCAGCTTGTTGGTGGGGTAATGGCCTACCAAGGCGA 46 Query 205 CGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTG 249 ||| ||||||| |||||||||| || |||||||| ||| |||| Sbjct 45 CGACGGGTAGCCGGCCTGAGAGGGCGACCGGCCACACTGGGACTG 1 >seq242504 Length=650 Score = 84.2 bits (92), Expect = 7e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 134 AAAGCTCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCT 193 |||||||||||||| ||||| | |||| | || ||||||||||| |||||||||| Sbjct 557 AAAGCTCCGGCGGTGAAGGATGAGCTCGCGGCCTATCAGCTAGTTGGTGAGGTAACGGCC 616 Query 194 TACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 |||||||| ||| ||||||| ||||||||| Sbjct 617 CACCAAGGCTTCGACGGGTAGCCGGCCTGAGAGG 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1493450404992