Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq181636 399 5e-109 seq97708 365 1e-98 seq110065 340 4e-91 seq143019 284 3e-74 seq74834 284 3e-74 seq213393 282 1e-73 seq192604 268 2e-69 seq253395 131 4e-28 >seq181636 Length=993 Score = 399 bits (442), Expect = 5e-109 Identities = 328/398 (82%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 491 AAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCG 432 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| ||||||||||||||| ||||||| || | ||||||| | |||||||| || ||| Sbjct 431 GAATCACTGGGCGTAAAGGGCGCGTAGGCGGCGTTTTAAGTCGGGGGTGAAAGCCTGTGG 372 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| | | | ||| || || |||| |||| |||| | || || ||||||| Sbjct 371 CTCAACCACAGAATTGCCTTCGATACTGTTTGGCTTGAGTATGGTAGAGGTCAGTGGAAC 312 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||||||| |||||||| |||||||||| | | ||||||||||||||||||||||| Sbjct 311 TGCGAGTGTAGAGGTGAAATTCGTAGATATTCGCAAGAACACCAGTGGCGAAGGCGGCTG 252 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||||| | |||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 251 ACTGGACCATTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 192 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG--GT 370 ||||||||||||||||||||||||||| | || ||| |||| || ||| ||| || Sbjct 191 TGGTAGTCCACGCCGTAAACGATGAATGCCAGCTGTTGGGGTGC----TTGCACCGCAGT 136 Query 371 GCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| ||||| | || ||||| ||||||||||| Sbjct 135 AGCGCAGCTAACGCTTTGAGCATTCCGCCTGGGGAGTA 98 >seq97708 Length=2017 Score = 365 bits (404), Expect = 1e-98 Identities = 324/402 (81%), Gaps = 5/402 (1%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 1937 GAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTG 1878 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 |||||| ||||||||||||||| ||||||| ||||| ||||||| |||||| | Sbjct 1877 CTCGGAATGACTGGGCGTAAAGGGCGCGTAGGCGGTTTGGACAGTCAGATGTGAAATTCC 1818 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGC--AGGAGGGGCAAG 186 |||| |||| ||| |||| ||||| || | |||| ||||| | ||||| | | Sbjct 1817 TGGGCTTAACCTGGGGGCTGCATTTGATACGTCCAGGCTTGAGTGTGAAAGAGGGTC--G 1760 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 ||||||||| ||||||| |||||||| |||||||||| ||| ||||||| |||||||||| Sbjct 1759 TGGAATTCCCAGTGTAGAGGTGAAATTCGTAGATATTGGGAAGAACACCGGTGGCGAAGG 1700 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 |||| |||| | |||||| ||||||| |||||||||||||||||||||||||||| Sbjct 1699 CGGCGACCTGGTTCATTACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAG 1640 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTC 366 ||||||||||||||||||| |||||||||| | || | ||| ||| | | ||| | Sbjct 1639 ATACCCTGGTAGTCCACGCTGTAAACGATGTGTGCTGGATGT-TGGGTGACTTAGTCATT 1581 Query 367 CGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | ||| || || ||||| ||||| | || ||||||||||| Sbjct 1580 CAGTGTCGTAGTTAACGCGATAAGCACACCGCCTGGGGAGTA 1539 >seq110065 Length=950 Score = 340 bits (376), Expect = 4e-91 Identities = 324/411 (79%), Gaps = 5/411 (1%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| || || ||||| ||||| |||||||||||||||||||||||||||||||||| || Sbjct 589 TACCTGGAGAAGAAGCACCGGCCAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 530 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 |||||| |||||||||||||||||||||| | |||||| ||||| | ||| || Sbjct 529 GAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTAGGCGGTTTGTCGCGTCGTTCGT 470 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||| | ||| ||| | | ||| || || | | || |||| | ||| Sbjct 469 GAAATCTTGATGCTTAACGTCAAGCGTGCGGGCGATACGGGCAGACTTGAGTACTACAGG 410 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || | |||||||||| |||||||||||||||||| |||||| |||||||||||| |||| Sbjct 409 GGAGACTGGAATTCCTGGTGTAGCGGTGAAATGCGCAGATATCAGGAGGAACACCGGTGG 350 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 ||||||||| | |||| ||||||||| |||||| |||||||||||| ||| ||||| Sbjct 349 CGAAGGCGGGTCTCTGGGTAGTAACTGACGCTGAGGAGCGAAAGCGTGGGTAGCGAACAG 290 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-- 358 ||||||||||||||||||||||||||||||||| || |||||||||| ||| | | | Sbjct 289 GATTAGATACCCTGGTAGTCCACGCCGTAAACGGTGGGTACTAGGTGT-GGGTCCCTTTT 231 Query 359 -AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | | ||| |||||| ||| |||||| |||||| || ||||||||||| Sbjct 230 CACGGGATCC-GTGCCGTAGCTAACGCATTAAGTACCCCGCCTGGGGAGTA 181 >seq143019 Length=458 Score = 284 bits (314), Expect = 3e-74 Identities = 284/366 (78%), Gaps = 3/366 (1%) Strand=Plus/Minus Query 45 GTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGT 104 |||||||||| | | ||||||||||||||||| ||||||||||| | |||||| ||| Sbjct 458 GTAATACGTATGTTACAAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGT 399 Query 105 TTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGG 164 | | ||| | |||||| | ||||||||| |||| |||| | | || | Sbjct 398 TGGTCGCGTCTGCTGTGAAATCCCGAGGCTCAACCTCGGGTCTGCAGTGGGTACGGGCCA 339 Query 165 GCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTA 224 |||||||||| | ||||| | |||||||||| ||||||||||| |||||| |||||| | Sbjct 338 GCTAGAGTGCGGTAGGGGAGAATGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCA 279 Query 225 GGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAG 284 ||||||||||| |||||||||| | | |||| | || |||||| |||||| |||||| Sbjct 278 GGAGGAACACCGATGGCGAAGGCAGTTCTCTGGGCCGTTACTGACGCTGAGGAGCGAAAG 219 Query 285 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAG 344 |||||||||| |||||||||||||||||||||||||||||||||||||| || |||| Sbjct 218 CGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGTTGGGCGCTAG 159 Query 345 GTGTCGGGGCGCAT--AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGG 402 ||| |||| ||| | | | | ||| |||||| |||||| |||| || ||||| Sbjct 158 ATGT-GGGGACCATTCCACGGTTTCCGTGTCGCAGCTAACGCATTAAGCGCCCCGCCTGG 100 Query 403 GGAGTA 408 |||||| Sbjct 99 GGAGTA 94 >seq74834 Length=1907 Score = 284 bits (314), Expect = 3e-74 Identities = 241/297 (81%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||||||||||||||||||||||||||||||||| || |||||| |||| Sbjct 297 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTGTCCG 238 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||| ||||||||||| | |||||| ||||| | ||| | |||||| | || Sbjct 237 GAATTATTGGGCGTAAAGAGCTCGTAGGCGGTTTGTCGCGTCGGCTGTGAAAACCCGAGG 178 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| |||| |||| | | || | | ||||||||| | ||||| | |||||| Sbjct 177 CTCAACCTCGGGCCTGCAGTGGGTACGGGCAGACTAGAGTGCGGTAGGGGAGATTGGAAT 118 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 |||| ||||||||||| |||||| |||||| |||||||||||| |||||||||| | | Sbjct 117 TCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGATC 58 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 |||| | ||||||||| |||||| ||||||| |||||||| ||||||| |||||| Sbjct 57 TCTGGGCCGTAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAGGAATAGATA 1 >seq213393 Length=301 Score = 282 bits (312), Expect = 1e-73 Identities = 243/301 (81%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 18 CCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATT 77 |||||||||| |||||||||||||||||||||||| |||| || ||||||| ||||||| Sbjct 1 CCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATT 60 Query 78 ACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAA 137 ||||||||||||| | |||||||||| | |||||||||| |||||| | ||| || Sbjct 61 ACTGGGCGTAAAGCGCGCGTAGGTGGCTAATTAAGTCAGATGTGAAATCCCCGAGCTTAA 120 Query 138 CCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTA 197 | || | ||| || || |||| |||||||| |||| || || ||||||| Sbjct 121 CTTGGGAATTGCATTCGATACTGGTTAGCTAGAGTATGGGAGAGGATGGTAGAATTCCAG 180 Query 198 GTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGG 257 |||||||||||||||||||||| || ||||||| ||| |||||||||| || |||| Sbjct 181 GTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGATGGCGAAGGCAGCCATCTGG 240 Query 258 ACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 317 || ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 241 CCTAATACTGACACTGAGGTGCGAAAGCATGGGGAGCAAACAGGATTAGATACCCTGGTA 300 Query 318 G 318 | Sbjct 301 G 301 >seq192604 Length=994 Score = 268 bits (296), Expect = 2e-69 Identities = 250/314 (80%), Gaps = 8/314 (3%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||| || Sbjct 552 AAGCTCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCTAGCGTTATTCG 493 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 || |||||||| |||||||| |||||| || | |||||||| ||||||| || | Sbjct 492 GATTTACTGGGTTTAAAGGGTCCGTAGGCGGGCTTGTAAGTCAGTGGTGAAATCTCATAG 433 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT---GCAGGAGGGGCAAGTGG 189 || ||| | ||||| ||||||||||||| || |||| | || || ||| ||| Sbjct 432 CTTAACTATGAAACTGCCATTGAAACTGCAGGTCTTGAGTTAGGTAGAAGTGGC---TGG 376 Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 ||| ||||||||||||||||||| ||||||||| |||||||| | |||||||| | Sbjct 375 AATAAGTAGTGTAGCGGTGAAATGCATAGATATTACTTAGAACACCAATTGCGAAGGCAG 316 Query 250 CTTGCT-GGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | || | || | |||||| |||| | |||||||||||| ||| ||||||||||||| Sbjct 315 GTCACTATGTCTAT-ACTGACGCTGATGGACGAAAGCGTGGGTAGCGAACAGGATTAGAT 257 Query 309 ACCCTGGTAGTCCA 322 |||||||||||||| Sbjct 256 ACCCTGGTAGTCCA 243 >seq253395 Length=645 Score = 131 bits (144), Expect = 4e-28 Identities = 111/135 (82%), Gaps = 9/135 (7%) Strand=Plus/Plus Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322 ||||||| ||||| |||| || ||||||||||| ||||||||||||||| |||||||| Sbjct 518 AACTGACGTTGAGGGACGAAGGCTTGGGGAGCAAATAGGATTAGATACCCTAGTAGTCCA 577 Query 323 CGCCGTAAACGATGAATACTAGGTGTCGGGGCGCA-TAAGTGCTCCGGTGCCGCAGCAAA 381 ||||||||||| ||| ||||| |||||| ||| ||||| |||||| ||||| || Sbjct 578 CGCCGTAAACGTTGAGTACTAAGTGTCG----GCATTAAGT----CGGTGCTGCAGCTAA 629 Query 382 CGCAATAAGTATTCC 396 |||| |||||| ||| Sbjct 630 CGCATTAAGTACTCC 644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1199866137344