Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq147260 457 2e-126 seq172168 302 8e-80 seq17638 266 6e-69 seq82506 253 4e-65 seq123 223 7e-56 >seq147260 Length=267 Score = 457 bits (506), Expect = 2e-126 Identities = 255/256 (99%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 197 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 196 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 137 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 136 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 77 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 76 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 17 Query 260 CTCTTCAACGAGGAAT 275 |||||||||||||||| Sbjct 16 CTCTTCAACGAGGAAT 1 >seq172168 Length=312 Score = 302 bits (334), Expect = 8e-80 Identities = 252/306 (82%), Gaps = 2/306 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTG-GCGGGTCGCCGGCTTCTTA 78 || ||||||||| |||| ||||||||| | | | || | ||| | |||||||| Sbjct 7 GAACGAGACCTTGACCTACTAAATAGCGCGACTAACATTCTGTTGGTTTGCTGCTTCTTA 66 Query 79 GAGGGACTATCGGCTCAAGCC-GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 ||||||||||| | || | |||||||||| ||||||||||||||||||||||||||| Sbjct 67 GAGGGACTATCAGAGAAAATCTGATGGAAGTTCGAGGCAATAACAGGTCTGTGATGCCCT 126 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 |||| |||||||||||||||||||||||||||| | ||||| ||||| || |||| || Sbjct 127 TAGACGTTCTGGGCCGCACGCGCGCTACACTGATACAGCCAGCGAGTCTATATCCTTCGC 186 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 || ||| ||||||||||||||||||| | ||||||||||||||| | |||||||| | Sbjct 187 CGAGAGGCGTGGGTAATCTTGTTAAACTGTATCGTGCTGGGGATAGTCCGTTGCAATTTT 246 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 | ||| |||||||||| |||||||||||| ||||||||| |||||||||||||||| Sbjct 247 CGGACTTGAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCC 306 Query 318 TGCCCT 323 |||||| Sbjct 307 TGCCCT 312 >seq17638 Length=4506 Score = 266 bits (294), Expect = 6e-69 Identities = 179/199 (90%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||| Sbjct 1949 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACCGATCCAGCGAGTT 2008 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 ||| |||| ||| |||| ||||||||||||| |||||| |||||| ||||||||||| Sbjct 2009 CATT-CCTTATCCGAAAGGATTGGGTAATCTTGTGAAACTCGGTCGTGATGGGGATAGAG 2067 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 ||||| |||||||||||||||||||||||| ||| ||||||| ||||||||||| |||| Sbjct 2068 CATTGTAATTATTGCTCTTCAACGAGGAATACCTTGTAAGCGTATGTCATCAGCATGCGT 2127 Query 306 TGATTACGTCCCTGCCCTT 324 ||| ||||||||||||||| Sbjct 2128 TGAATACGTCCCTGCCCTT 2146 Score = 122 bits (134), Expect = 2e-25 Identities = 92/107 (86%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| |||||||||||||| |||| ||| ||| |||||| |||||||||| Sbjct 1449 GAACGAGACCTTCTCCTGCTAAATAGCCCGGCCGGCTACGGCTGGTCGCTGGCTTCTTAG 1508 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 ||||||||||||| || ||||||||||| ||||||||||||||| Sbjct 1509 AGGGACTATCGGCGATTAGTCGATGGAAGTTGGAGGCAATAACAGGT 1555 >seq82506 Length=2398 Score = 253 bits (280), Expect = 4e-65 Identities = 178/203 (88%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| Sbjct 1880 CTGTGATGCCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTG 1821 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | ||||| ||| || | |||||||| ||||| ||||| ||||||||||||||| ||| Sbjct 1820 GGGCCCCTTGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAG 1761 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 | ||| |||| ||||||||||||||||||| |||||||||||| ||||||||| |||| Sbjct 1760 CTTTGTAATTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGT 1701 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||| ||||||||||||||||||| Sbjct 1700 TGACTACGTCCCTGCCCTTTGTA 1678 >seq123 Length=7390 Score = 223 bits (246), Expect = 7e-56 Identities = 207/258 (80%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| || || | ||||| || | ||||| |||||||||||||||| Sbjct 4894 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 4837 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || | |||| Sbjct 4836 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 4780 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || ||||| ||| | ||| || | | |||||| ||||||||||||| | | ||| Sbjct 4779 CCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 4720 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||| | | | |||||||||| ||||||||||||| ||||| ||| |||||||||| Sbjct 4719 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 4660 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 4659 ACGTCCCTGCCCTTTGTA 4642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944575469824