Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq40448 313 8e-83 seq40447 309 1e-81 seq29733 255 2e-65 seq41844 143 9e-32 seq41820 136 1e-29 seq41843 122 3e-25 seq255881 113 2e-22 seq40460 107 6e-21 seq41845 104 8e-20 seq104245 87.8 6e-15 seq242598 77.0 1e-11 >seq40448 Length=2356 Score = 313 bits (346), Expect = 8e-83 Identities = 305/389 (78%), Gaps = 3/389 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| ||| ||||| | |||||||||||| ||||||||| |||| Sbjct 1315 CGAGTCTGAATAGGGCGTTTAGTTGCTGGTAGAAGACCCGAAACCGAGTGATCTAGCCAT 1256 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 ||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||| Sbjct 1255 GGCCAGGCTGAAGGTGCGGTAACACGCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAG 1196 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | ||||||||||||||| |||||||||||||| || |||||| ||| ||||||||||||| Sbjct 1195 TCGGGGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAGATAGCTGGTTCTC 1136 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGT-ATCACCATCGGGGGTAGAGCACTGTTATG 239 ||||| |||||||||||| | || || | |||| ||||||||||||||| | Sbjct 1135 CGCGAAATCTATTTAGGTAGATCGTCGCGTGTTGACCACGGGGGGTAGAGCACTGGATGG 1076 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||||| | ||||||||||| |||||||||||| | | | || |||| Sbjct 1075 GCTAGGGGGCTCCAAAGGCTTACCAAACCTAACCAAACTCCGAATACCCGTGAG-TTTAG 1017 Query 300 CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTAT 359 ||||| || || ||||||||||||||| | ||||||| || | || ||| Sbjct 1016 CGCGGCAGACAGACGGTGGGTGCTAAGGTCCATCGTCGAGAGGGAAACAGCCCAGACCGC 957 Query 360 CAGCTAAGGCCCCGAAATGACAGCTAAGT 388 ||||||||||||| |||| ||||||| Sbjct 956 CAGCTAAGGCCCCTAAATCGTGGCTAAGT 928 >seq40447 Length=4142 Score = 309 bits (342), Expect = 1e-81 Identities = 332/431 (77%), Gaps = 10/431 (2%) Strand=Plus/Minus Query 50 GATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAA 109 |||||| |||| ||||||||||||||| |||||| || ||||||||||||||| | ||| Sbjct 2507 GATCTAGGCATGACCAGGATGAAGGTGCAGTAACATGCACTGGAGGTCCGAACCGATTAA 2448 Query 110 TGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAAT 169 |||||||| ||| |||||| |||||||||||||||||||| || ||||| |||||| Sbjct 2447 CGTTGAAAAGTTACCGGATGACTTGTGGGTAGGGGTGAAAGGCCAATCAAACCGGGAAAT 2388 Query 170 AGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTC-AAGTATCACCATCGGGGGTAGA 228 ||||||||||| ||||||||||| |||||||||||| | | |||| | ||||||||| Sbjct 2387 AGCTGGTTCTCCGCGAAAACTATTGAGGTAGTGCCTCGCACGAACACCTTAGGGGGTAGA 2328 Query 229 GCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGC 288 |||||| |||||||||||| | || ||||||||| |||||||||||| | Sbjct 2327 GCACTGGATGGGCTAGGGGGTC-GCGAGATCTACCAAACCTAACCAAACTCCGAATACCT 2269 Query 289 ATCAGTTTTACCGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAA 346 | ||| || ||||||| || ||| |||||||||||||||| | | ||| || Sbjct 2268 AAGAGTGATA-TGCGGGAGACAGACGGC--GGGTGCTAAGGTCCGTCGTCAAAAGGGAAA 2212 Query 347 GAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGA 406 | || ||| ||||||||||||| |||| | |||||| | || | || || Sbjct 2211 CAGCCCTGACCTACAGCTAAGGCCCCCAAATCGTATCTAAGTGGGA--AAGCATGTGGGA 2154 Query 407 TTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACA 466 | | || ||| | |||| |||||||| |||||||||| || |||||||| |||||||| Sbjct 2153 CTCCCAAAACAACCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAACA 2095 Query 467 GCTCACTAGTC 477 ||||||| ||| Sbjct 2094 GCTCACTGGTC 2084 >seq29733 Length=2375 Score = 255 bits (282), Expect = 2e-65 Identities = 352/484 (73%), Gaps = 10/484 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGA--CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| |||||||||| |||| || | | |||||||||| | ||||||||||||| Sbjct 1303 CGAGTCTGAACAGGGCGGTTCAGTGGCGTGTTCTAGACCCGAAGCGGAGTGATCTACCCA 1362 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||| ||||| |||||| ||| | |||||| ||||||||||| |||||||| Sbjct 1363 TGGCCAGGGTGAAGCGTCGGTAAGACGACGTGGAGGCCCGAACCCACTTCAGTTGAAAAT 1422 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 ||||||||||||||||||||||||||||||| || |||||| | |||||||||||| Sbjct 1423 GGAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCCGTGATAGCTGGTTCT 1482 Query 180 CTCCGAAAACTATTTAGGT--AGTGCCTCAAGTATCACCATCGGGGGTAGAGC-ACTGTT 236 | |||||| |||||||| || | | || || || || ||| |||||||| |||| Sbjct 1483 CCCCGAAATGCATTTAGGTGCAGCGTCGCATGTTTC-TCACCGGAGGTAGAGCTACTG-G 1540 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTT 296 ||||| ||| | | |||| | |||||||||||||| | ||| Sbjct 1541 ATGGCGGATGGGCCCTACAAGGTTACTGATGTCAGCCAAACTCCGAATGCCGGTGAGTGA 1600 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | |||| |||||| ||| | |||||| ||| ||||||| || | || || Sbjct 1601 GAGTGCGGCAGTGAGACTGCGGGCGATAAGGTTCGTAGTCGAGAGGGAAACAGCCCAGAT 1660 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 | ||||||||||| || | |||||| || || || || | | || ||||| Sbjct 1661 CGCCGGCTAAGGCCCCTAAGCGTGTACTAAGTGGAA--AAGGATGTGGGGTCGCGAAGAC 1718 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 | | |||| |||||||| |||||||||| | || ||||||||||||| |||||||| || Sbjct 1719 AACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGGT 1777 Query 477 CGAG 480 | || Sbjct 1778 CAAG 1781 >seq41844 Length=219 Score = 143 bits (158), Expect = 9e-32 Identities = 124/153 (81%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||||||| |||||||| ||| || | | ||||||||| | |||||||||| ||| Sbjct 65 CGAGTCCGAATAGGGCGACTGAGTGGCGCGATCAAGACCCGAAGCGAAGTGATCTATCCA 124 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 ||| |||| ||||| ||||| || | |||||| |||||||||| | |||||||| Sbjct 125 TGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAAC 184 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 | |||||||||||||||||||||||||||||| Sbjct 185 CTGGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 217 >seq41820 Length=210 Score = 136 bits (150), Expect = 1e-29 Identities = 117/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGA--CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| ||||||| ||||||| | |||||||||| | |||||||||| ||| Sbjct 67 CGAGTCTGAATAGGGCGATTCAGTCGCATGTCCTAGACCCGAAGCGAAGTGATCTATCCA 126 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||| ||||| |||||| ||| | |||||| ||||||||||| |||||||| Sbjct 127 TGGCCAGGTTGAAGCGACGGTAAGACGTCGTGGAGGACCGAACCCACTTCAGTTGAAAAT 186 Query 120 TTAGGGGATGAGCTGTGGGTAGGG 143 |||||||||||||||| ||||| Sbjct 187 GGAGGGGATGAGCTGTGGATAGGG 210 >seq41843 Length=212 Score = 122 bits (134), Expect = 3e-25 Identities = 114/144 (79%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 ||||| |||| || ||| |||||| | |||||||||| | |||||||||| ||| Sbjct 69 CGAGTTCGAATAGAGCGTTTGAGTCGCATGCCCTAGACCCGAAGCGAAGTGATCTATCCA 128 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||| ||||| |||||| ||| | |||||| ||||||||||| |||||||| Sbjct 129 TGGCCAGGTTGAAGCGACGGTAAGACGTCGTGGAGGACCGAACCCACTTGGGTTGAAAAC 188 Query 120 TTAGGGGATGAGCTGTGGGTAGGG 143 |||||||||||||||| ||||| Sbjct 189 CGAGGGGATGAGCTGTGGATAGGG 212 >seq255881 Length=344 Score = 113 bits (124), Expect = 2e-22 Identities = 117/152 (77%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| ||||| | ||| | || ||||| ||||||| ||||||||||||| Sbjct 191 CGAGTCTGAATAGGGCTATTAGTTAGTAGGATTAGACGCGAAACCTTGTGATCTACCCAT 250 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||| | |||||||| |||||| ||||||| | | |||||||| | Sbjct 251 GGGCAGGTTGAAGCTTTGGTAACACAAAGTGGAGGACCGAACCGGTTGACGTTGAAAAGT 310 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 |||||| ||||||||||||||||||||| Sbjct 311 CTTCGGATGACCTGTGGGTAGGGGTGAAAGGC 342 >seq40460 Length=252 Score = 107 bits (118), Expect = 6e-21 Identities = 183/258 (71%), Gaps = 13/258 (5%) Strand=Plus/Plus Query 224 GTAGAGCACTGTTATGGCTAGGG--GGTCATTGCGACTTACCAAACCATTGCAAACTCCG 281 ||||||||||| |||||||| | || ||| ||||||||| ||||||||| Sbjct 1 GTAGAGCACTGGATGGGCTAGGGCCGCCCACAGCGG--TACCAAACCCAACCAAACTCCG 58 Query 282 AATGCGCATCAGTTTTACCGCGGGAGTGAG--GGCATGGGTGCTAAGGTCCGTGCCCGAG 339 ||| | | || |||||||| | ||| ||||||||| |||||| ||| Sbjct 59 AATACCTGGGAACTTG--CGCGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGGAG 114 Query 340 AGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGA 399 ||| || || || ||| | ||||||||||||| || | ||||||| | || || Sbjct 115 AGGGAAACAACCCTGACCAACAGCTAAGGCCCCCAATTCGTGGCTAAGTGGGA--AAGGA 172 Query 400 AGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTG 459 || || | | || ||| | |||| |||||||| |||||||||| || |||||||| | Sbjct 173 TGTGGGAATCCCAAAACAACCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAG 231 Query 460 CGTAACAGCTCACTAGTC 477 |||||||||||||| ||| Sbjct 232 CGTAACAGCTCACTGGTC 249 >seq41845 Length=879 Score = 104 bits (114), Expect = 8e-20 Identities = 149/208 (72%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 273 CAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGT 332 |||||||||||||| | ||| | ||| | |||||| |||| | |||| | | | Sbjct 799 CAAACTCCGAATGCCGGTAAGTGAGAGCGCAGCAGTGAGACGGTGGGGGATAAGCTTCAT 740 Query 333 GCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAA 392 ||||||| || || || ||||| || |||||||||| || | ||||||| | Sbjct 739 CGTCGAGAGGGAAACAACCCAGACTACCAACTAAGGCCCCTAAGCGTGTGCTAAGTGGGA 680 Query 393 CTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTA 452 || || || |||| ||||| | |||| |||||||| |||||||||| | || | Sbjct 679 --AAGGATGTGGAGTTGCATAGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGA 623 Query 453 AAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||||||||| |||||||| ||| || Sbjct 622 AAGAGTGCGTAATAGCTCACTGGTCAAG 595 >seq104245 Length=717 Score = 87.8 bits (96), Expect = 6e-15 Identities = 183/264 (69%), Gaps = 8/264 (3%) Strand=Plus/Plus Query 219 CGGGGGTAGAGCACTGTTATGG-CTAGGGGGTCATTGCGACTTACC-AAACCATTGCAAA 276 ||| |||||||||||| ||| ||| |||| | | |||||| ||| || |||| Sbjct 27 CGGAGGTAGAGCACTGG-ATGATCTAAGGGGCCCACAAG-CTTACCGAAATCAAC-CAAA 83 Query 277 CTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 |||||||||| | ||| | ||| | |||||| |||| |||||| ||| | | Sbjct 84 CTCCGAATGCCGGTAAGTGAGAGCGCAGCAGTGAGACTGTGGGGGCTAAGCTCCATAGTC 143 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | || || | | ||||| ||| || | ||||||| | || Sbjct 144 GAGAGGGAAACAGCCCAGATCGCCGGTTAAGGTCCCTAAGCGTGTGCTAAGTGGGA--AA 201 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || |||| ||||| | |||| |||||||| |||||||||| | || ||||| Sbjct 202 GGATGTGGAGTTGCACAGACAACCAGGAGGTTGGCTTAGAAGCAGCCACCC-TTGAAAGA 260 Query 457 GTGCGTAACAGCTCACTAGTCGAG 480 |||||||| |||||||| ||| || Sbjct 261 GTGCGTAATAGCTCACTGGTCAAG 284 >seq242598 Length=676 Score = 77.0 bits (84), Expect = 1e-11 Identities = 59/69 (86%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 458 TGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTC 517 ||||||||||||||||||||||| ||| ||| ||||||||||||||| || || | | Sbjct 676 TGCGTAACAGCTCACTAGTCGAGCGGTCCGGCATGGATAATAATCGGGCATAAACATAT- 618 Query 518 TACCGAAGC 526 ||||||||| Sbjct 617 TACCGAAGC 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1684918405632