Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq40447 134 3e-29 seq29733 127 4e-27 seq40448 109 1e-21 seq64689 107 4e-21 seq222154 84.2 4e-14 >seq40447 Length=4142 Score = 134 bits (148), Expect = 3e-29 Identities = 143/184 (78%), Gaps = 6/184 (3%) Strand=Plus/Minus Query 138 GCTGAATACATAGGTAT-GCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAG 196 |||||||||||||| | | |||||||| |||||||||||||||||| |||||||| || Sbjct 2999 GCTGAATACATAGGCTTCGTGAAGCGAACCCGGCGAACTGAAACATCTCAGTAGCTGGAG 2940 Query 197 GAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGA-GCCTTTAC 255 ||||||| ||||||||||||||| |||||||||||||||| ||| | ||| | | Sbjct 2939 GAAAAGACATCAACCGAGATTCCGTTAGTAGTGGCGAGCGAACGCGGACCAGGCCAGTGC 2880 Query 256 GAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCC 315 || | || || ||| ||| |||||||| |||||||||||||| ||||| Sbjct 2879 CTGA-ATTTCAA---CTAGCAGAACGATCTGGAAAGTTCGGCCATAGCGGGTGACAGCCC 2824 Query 316 CGTA 319 |||| Sbjct 2823 CGTA 2820 Score = 96.9 bits (106), Expect = 6e-18 Identities = 88/110 (80%), Gaps = 7/110 (6%) Strand=Plus/Minus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGG 70 |||||||||||||| ||||||||||||||||||| | | |||||||||| |||| Sbjct 3173 GTGGATGCCTTGGCACATACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCGTAGGGG 3114 Query 71 A---GTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 | |||||||| ||||||||| ||||||||||||||||||||| Sbjct 3113 AGCTGTGAGCAA----GCTTTGATCCTGCGATTTCCGAATGGGGAAACCC 3068 >seq29733 Length=2375 Score = 127 bits (140), Expect = 4e-27 Identities = 183/253 (72%), Gaps = 14/253 (6%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGG---CGATGAAGGACGTAGTAGCTTGCGATAAGCTGC 66 |||||||||||||| | |||| ||||||||||||| |||| |||||| || | Sbjct 592 GGTGGATGCCTTGG---TACCAGGAGCCGATGAAGGACGTGGTAGGCCGCGATAGGCCTC 648 Query 67 GGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC--CCTT 124 |||||| ||||| || ||||||| | | ||||||||||||||||| || || | Sbjct 649 GGGGAGCTGTCAAACGAGCTGTGATCCGAGGGTGTCCGAATGGGGAAACCCAGCACCCGT 708 Query 125 --TGGGTCATTGCATGC---TGAATACATAGGTA-TGCAAAGCGAACGCGGCGAACTGAA 178 |||| || | | ||||| ||||| || || ||||| || ||| |||| Sbjct 709 GATGGGGTGTTACCCACCGTTGAATGTATAGGCGGTGTGGAGGGAACGTGGGGAAGTGAA 768 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 |||||| |||| | |||||| ||||| |||| | |||||| |||||||||||||||| Sbjct 769 ACATCTCAGTACCCACAGGAAGAGAAAACAACAGTGATTCCGTGAGTAGTGGCGAGCGAA 828 Query 239 ATGGGATGAGCCT 251 | ||| ||| || Sbjct 829 AGCGGAGGAGGCT 841 >seq40448 Length=2356 Score = 109 bits (120), Expect = 1e-21 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 136 ATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 || |||||| |||||| | |||||||| ||| |||||||||||||| |||| ||| | Sbjct 1753 ATCCTGAATCCATAGGGGTTTGAAGCGAACCCGGGGAACTGAAACATCTCAGTACCTGGA 1694 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 |||||||| |||||| |||||||| |||||||||||||||| Sbjct 1693 GGAAAAGACATCAACAGAGATTCCGCTAGTAGTGGCGAGCGAA 1651 Score = 104 bits (114), Expect = 4e-20 Identities = 94/117 (80%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||||||||||||||||||| | || ||||||||||||| | ||| ||||||| Sbjct 1965 AGGGCACATGGTGGATGCCTTGGCACCAAGAGCCGATGAAGGACGTGGGAGCCTGCGATA 1906 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 ||| |||||| || ||| ||||||||| ||||||||||||||||||||| Sbjct 1905 AGCCTTGGGGAG-CTGCGAACGAGCTTTGATCCAGGGATTTCCGAATGGGGAAACCC 1850 >seq64689 Length=1551 Score = 107 bits (118), Expect = 4e-21 Identities = 157/221 (71%), Gaps = 16/221 (7%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | || ||| ||||||||||| | ||||||| Sbjct 921 AGAGCAGACGGTGGATGCCTTGGCATCTGGAGCCGAAGAAGGACGTAGCAATCTGCGATA 980 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| |||||||| || | ||||||||||| ||| ||||||||||||||||| || Sbjct 981 AGCCTCGGGGAGTTGATAAGCGAACTTTGATCCGAGGATGTCCGAATGGGGAAACCCCGC 1040 Query 121 C--------CTT-TG------GGTCATTGCATGCTGAATACATA-GGTATGCAAAGCGAA 164 | ||| || ||| | | | ||||||| ||| || | | || ||| Sbjct 1041 CAGTGCGTACTTGTGCGACCTGGTGACTCCCGCCTGAATATATAGGGCGGGTAGAGGGAA 1100 Query 165 CGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAA 205 || || ||| |||||||||| |||| | |||||| ||||| Sbjct 1101 CGTGGGGAAGTGAAACATCTCAGTACCCACAGGAAGAGAAA 1141 >seq222154 Length=451 Score = 84.2 bits (92), Expect = 4e-14 Identities = 86/111 (77%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||| |||||||| ||| | | |||||| ||||||||| ||| ||||| ||||| | Sbjct 316 ATGGCGGATGCCTAGGCTTTCAGAGGCGAAGAAGGACGTGGTAAGCTGCGAAAAGCTCGG 375 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCG 118 |||| || ||| |||| | ||||| |||| ||||||||||| |||||| Sbjct 376 GGGATTG-GCACACACGAATAGATCCCGAGATGTCCGAATGGGGCAACCCG 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915855269728