Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq123 318 2e-84 seq305 210 7e-52 seq83309 168 2e-39 seq22537 156 1e-35 seq9121 129 2e-27 seq7325 125 2e-26 seq32980 91.5 5e-16 seq84007 82.4 2e-13 seq40447 75.2 4e-11 >seq123 Length=7390 Score = 318 bits (352), Expect = 2e-84 Identities = 181/184 (98%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 350 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 TCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 60 Query 410 TTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 120 Query 470 CGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 121 CGCTTGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 180 Query 530 AACA 533 |||| Sbjct 181 AACA 184 >seq305 Length=2271 Score = 210 bits (232), Expect = 7e-52 Identities = 164/194 (85%), Gaps = 9/194 (5%) Strand=Plus/Minus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238 || ||||||| |||| || | |||||||| ||||| ||| ||| |||| || Sbjct 191 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 135 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| |||||||||||| ||| | |||| | | |||||||||||||||||||| Sbjct 134 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 75 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 74 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 15 Query 359 AGTAGATAGGGACA 372 |||||||||||||| Sbjct 14 AGTAGATAGGGACA 1 Score = 118 bits (130), Expect = 3e-24 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 425 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 366 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| || | ||||||| Sbjct 365 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 306 >seq83309 Length=467 Score = 168 bits (186), Expect = 2e-39 Identities = 116/131 (89%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 92 AAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGACCTTAACGCCAG 151 |||||||||||||||||||||| |||||||||||| |||||||||||||||||| || | Sbjct 1 AAACTCCCCACCTGACAATGTCTTCAACCCGGATCAGCCCGCGAAGGACCTTAATGCTAA 60 Query 152 AAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAG 211 || |||| ||||| |||| ||||||||||||| |||||||||| ||||||| ||||| Sbjct 61 AAGATGGGACGTGAATCCCAGCTCCGCTTCATTGAATAAGTAAAAAGACGATAAAGGTAG 120 Query 212 TGGTATTTCAC 222 ||||||||||| Sbjct 121 TGGTATTTCAC 131 >seq22537 Length=3125 Score = 156 bits (172), Expect = 1e-35 Identities = 91/94 (97%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 35 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||||||||||||||||||||||||||||||||| Sbjct 34 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 1 >seq9121 Length=2123 Score = 129 bits (142), Expect = 2e-27 Identities = 128/165 (78%), Gaps = 12/165 (7%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC-CAAGCC-------- 330 |||||||||||| |||||||||||||||||||| |||||| |||||| Sbjct 165 ACTAGAGTCAAGTTCAACAGGGTCTTCTTTCCCTGCTGATAAAAAACAAGCCGTTCAAAC 106 Query 331 --CGTTCCCTTGGCT-GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387 |||||||||| | |||||||| | | | || ||||||||| ||||||||||| Sbjct 105 AACGTTCCCTTGTTTCGTGGTTTCACAAATAAATAAGTAGGGACAGAAGGAATCTCGTTG 46 Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 || |||||||| |||||| ||||| ||||||||||||||||||| Sbjct 45 CTCAATTCATGCACGTCACCAATTAAATGACGAGGCATTTGGCTA 1 Score = 75.2 bits (82), Expect = 4e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 101 ||||||||| ||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct 312 CCTTAGGACTTCTGTGTTATTTTTTAACAGAAGTGCCGCCCCAGCCAAACTCCCCA 257 >seq7325 Length=5531 Score = 125 bits (138), Expect = 2e-26 Identities = 71/72 (99%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4 TAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 63 Query 421 GGCATTTGGCTA 432 |||||||||||| Sbjct 64 GGCATTTGGCTA 75 >seq32980 Length=3810 Score = 91.5 bits (100), Expect = 5e-16 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1859 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 1908 >seq84007 Length=559 Score = 82.4 bits (90), Expect = 2e-13 Identities = 101/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 92 AAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGACCTTAACGCCAG 151 |||||||||||||||||||||| ||| |||||| | || | |||| ||| Sbjct 559 AAACTCCCCACCTGACAATGTCTCCAATTCGGATCAAGCATA-AATGCTTTTAAGTCCAA 501 Query 152 AAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAG 211 || ||| || || |||| |||||||||||| |||||||| | ||||| ||||| Sbjct 500 AAGGTGGGTCGTTAAACCCAGCTCCGCTTCATTGGATAAGTAAAGAGACGATGGAGGTAG 441 Query 212 TGGTATTTCACTTGCGC 228 ||||||||||| |||| Sbjct 440 TGGTATTTCACCGGCGC 424 >seq40447 Length=4142 Score = 75.2 bits (82), Expect = 4e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||||||| | |||||| |||||| ||| ||| | ||| ||| ||| |||| Sbjct 1321 GACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 1380 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || || |||||||| |||||||||||| | |||| Sbjct 1381 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTT 1426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1630669138784