Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq121782 601 1e-169 seq224339 527 2e-147 seq200237 340 6e-91 seq40447 307 4e-81 seq215055 246 1e-62 seq40448 242 1e-61 seq224338 219 1e-54 >seq121782 Length=912 Score = 601 bits (666), Expect = 1e-169 Identities = 417/467 (89%), Gaps = 8/467 (2%) Strand=Plus/Plus Query 99 TTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCA 158 ||||||||| |||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct 330 TTTGGGAGG-CAACCGCCCCAGTTAAACTACCCATCAGGCACTGTCCCTGAACCAGATCA 388 Query 159 TGGGCCAAGGTT-AGATATCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAAC 217 ||| || ||||| || |||||| |||| ||||||||||||||||||||||||||||| Sbjct 389 TGGTCCGAGGTTGAGGTATCCAATACGATCAGAGTGGTATTTCAACAACGACTCCACCCA 448 Query 218 CACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAA 277 |||| ||||| | ||| ||||||||||||||||||||||||||| |||||| |||| Sbjct 449 CACTGGCGTGCGGGTTTCACAGTCTCCCACCTATCCTACACAAACCGAACCGAACACCAA 508 Query 278 TACCAAGCTATAGTGAAGGTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTT 337 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 509 TACCAAACTATAGTGAAGGTCCCGGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTT 568 Query 338 TACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCAT 397 |||||||||||||||||| ||| | |||||||||||||||||| | |||||||||||||| Sbjct 569 TACTCGTACTGCAATTTCGCCGAGTCTGTGGTTGAGACAGCAGAGAAGTCGTTACGCCAT 628 Query 398 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTAC 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 629 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTAC 688 Query 458 CACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAG 517 ||||||||||||||||||||| |||| | || |||| | | | | | | | || | Sbjct 689 CACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCAC-CCCGAAG-GAT----TAACCGG 742 Query 518 TCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 743 TCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCG 789 >seq224339 Length=700 Score = 527 bits (584), Expect = 2e-147 Identities = 391/455 (86%), Gaps = 10/455 (2%) Strand=Plus/Plus Query 110 AACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGT 169 ||||||||||||||||||||||||||||||||||||| | || ||||| || || | || Sbjct 1 AACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTGAACCGGATCACGGTCCGAAGT 60 Query 170 TAGATATCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGC 229 |||||||||| | ||||||||||||||||||| |||||||| | |||| ||||| | Sbjct 61 TAGATATCCAGAGTGACCAGAGTGGTATTTCAACAATGACTCCACGAACACTGGCGTGCC 120 Query 230 CGCATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATA 289 ||| ||| ||||||||||||||||||||||| || ||||||| ||||||||||||| || Sbjct 121 CGCTTCAAAGTCTCCCACCTATCCTACACAAGCCACACCGAACACCAATACCAAGCTGTA 180 Query 290 GTGAAGGTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349 || |||||| |||||||||| |||||||| ||||| |||||||||||||||||||| ||| Sbjct 181 GTAAAGGTCACGGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGC 240 Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCG 409 |||||| ||| | | |||||||||||| ||| |||||||||||||||||||||||||| Sbjct 241 AATTTCGCCGAGTTCGCGGTTGAGACAGCTGGGAAGTCGTTACGCCATTCGTGCAGGTCG 300 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 360 Query 470 CTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCT 529 ||||||||| ||| ||| | | ||| | || || |||||||||||| Sbjct 361 CTGGGGCTTAAAT--------TCAGA-GCTTCGTCG-AAACTAACCCTTCCTCTTAACCT 410 Query 530 TCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||||||||||||||||||||| ||| Sbjct 411 TCCAGCACCGGGCAGGCGTCAGTCCGTATACATCG 445 >seq200237 Length=261 Score = 340 bits (376), Expect = 6e-91 Identities = 230/258 (89%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 187 CAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCA 246 ||||||||||||||||| |||||||| |||||| ||||| |||| ||| ||||||||| Sbjct 258 CAGAGTGGTATTTCAACGTTGACTCCACGACCACTGGCGTGCCCGCTTCAAAGTCTCCCA 199 Query 247 CCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCCGGGGTC 306 |||||||||||||| || |||||| |||||||||||||||||| |||||||||||||| Sbjct 198 CCTATCCTACACAAGTCGAACCGAACACCAATACCAAGCTATAGTAAAGGTCCCGGGGTC 139 Query 307 TTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGT 366 ||| |||||||||||||| |||||||||||||||||||||||||||||| ||| | | Sbjct 138 TTTCCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTACTGCAATTTCGCCGAGTCCAC 79 Query 367 GGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGG 426 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 78 GGTTGAGACAGCGCCCAAGTCGTTACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGG 19 Query 427 AATTTCGCTACCTTAGGA 444 |||||||||||||||||| Sbjct 18 AATTTCGCTACCTTAGGA 1 >seq40447 Length=4142 Score = 307 bits (340), Expect = 4e-81 Identities = 363/492 (74%), Gaps = 21/492 (4%) Strand=Plus/Plus Query 74 GAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCAC 133 |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| | Sbjct 1022 GAACCTTTGGGCGCCTCCGTTACATTTTGGGAGG-CGACCGCCCCAGTCAAACTACCCGC 1080 Query 134 CAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTG 193 || | ||||| || | | | || | |||||||| ||| | ||| ||| Sbjct 1081 CACAGAGGGTCCCTGTTCCGGCTTACGGAACGAGGTTAGACATCAGAAAACAACAGGGTG 1140 Query 194 GTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCC 253 |||||||| | | | ||||||| | || ||| | || ||| || ||||||||||| | Sbjct 1141 GTATTTCACCTATGGCTCCACATCAGCTGGCGCCGATGCTTCAAAGCCTCCCACCTATGC 1200 Query 254 TACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCG 312 |||||| || ||||||| | ||||| ||| ||||| | |||||||||| || Sbjct 1201 TACACAGTTTCTTCCTAATGCCACTCTGAAGCTGCAGTAAAGGTGCACGGGGTCTTTCCG 1260 Query 313 TCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGA 372 || ||||| | | ||||||| || | | ||||||| | | || ||| | || Sbjct 1261 TCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGCATGTCCTGGA 1320 Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 GACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 1380 Query 433 GCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTC 492 |||||||||||| ||||||||||| ||||||||||| |||||||| || Sbjct 1381 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTCATTT--------- 1431 Query 493 ACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGT 552 || | | | ||| ||| |||||||||| |||||||||||||||||| Sbjct 1432 -CAGAGCTTG---------CACCCCTCCACTTAACCTTCAGGCACCGGGCAGGCGTCAGG 1481 Query 553 CCGTATACCTCG 564 || ||||| ||| Sbjct 1482 CCCTATACGTCG 1493 >seq215055 Length=728 Score = 246 bits (272), Expect = 1e-62 Identities = 391/566 (69%), Gaps = 71/566 (13%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||| ||||||||| ||||| ||| |||||||| | | | || || Sbjct 101 TCGACTTGTAGGTCTCACAGTCAAGCACCCTTATGCCATTACACTCTACGCACGGTTACC 160 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||||||| ||||||| ||||||||||| ||| ||||| | ||| |||||| Sbjct 161 AAGCGTGCTGAGGGTACCTTTGAAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAG 219 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAG--GTTAGATATCC 178 | ||||||||||||| ||| ||||| || | ||| ||||| | Sbjct 220 TCAAACTACCCACCACGCAATGTCCT---------TCTTT----AAGAAGTTAGGCTCCA 266 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | || | || ||||||||||||| | |||||||| |||||||||| | || ||| | Sbjct 267 AGTAAGTAAAGGGTGGTATTTCAACGTTGGCTCCACAAACACTAGCGTGCCTGCTTCAAA 326 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGG-T 297 | ||||||||||||||||||| | || || | |||||| ||| |||||| |||| | Sbjct 327 GCCTCCCACCTATCCTACACATTACTTACTCAAAGTCAATACGAAGTTATAGTAAAGGTT 386 Query 298 CCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | | |||||||||||||| ||| | || ||||||| || |||| ||||||||| Sbjct 387 CACAGGGTCTTTTCGTCCCATTGCGGGTAATCGGCATCTTCACCGATACTACAATTTCAC 446 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTA 416 || || |||| |||||||| | || ||||||| ||||||||||||||| Sbjct 447 CGAGCTCGTGGCTGAGACAG-TGCCCAGATCGTTACACCATTCGTGCAGGTC-------- 497 Query 417 CCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGC 476 ||||||||||| ||||||||||||||||| Sbjct 498 ------------------------------GTTATAGTTACGGCCGCCGTTTACTGGGGC 527 Query 477 TTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCT--CTTAACCTTCCAG 534 |||| | | ||| || | ||| || || | ||| ||||||||||||| Sbjct 528 TTCAGTCAAACGCTTCGCTTACC----------CTAAC--GCCCTTCCTTAACCTTCCAG 575 Query 535 CACCGGGCAGGCGTCAGTCCGTATAC 560 ||||||||||| ||||| || ||||| Sbjct 576 CACCGGGCAGGTGTCAGACCCTATAC 601 >seq40448 Length=2356 Score = 242 bits (268), Expect = 1e-61 Identities = 258/339 (76%), Gaps = 30/339 (9%) Strand=Plus/Plus Query 231 GCATCATAGTCTCCCACCTATCCTACACAAACCGCA----CCGAATGCCAATACCAAGCT 286 || ||| || ||||||||||||||||||| ||| || |||||| | | ||||| Sbjct 1 GCTTCAAAGCCTCCCACCTATCCTACACA----GCATTTTCCTGATGCCACTGCAAAGCT 56 Query 287 ATAGTGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTA 345 ||| ||||| | |||||||| |||| |||| ||| | ||||||| || | | Sbjct 57 GCAGTAAAGGTTCATAGGGTCTTTCCGTCTGACCGCAGGAACCCCGCATCTTCACGGGGA 116 Query 346 CTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCA 404 | ||||||||| | ||| || | |||||||| |||||| ||||||||||||||||||| Sbjct 117 ATTCAATTTCACTGAGCCGATGCTGGAGACAGC-GGGGAGATCGTTACGCCATTCGTGCA 175 Query 405 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCC 464 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 176 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCC 235 Query 465 GTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTT 524 |||||| |||||||| || ||| | | ||||| ||||||| Sbjct 236 GTTTACCGGGGCTTCGAT--------TCAAA-----------GCTCTCACCTCTCCTCTT 276 Query 525 AACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||| |||||||||||||||||| || ||||| || Sbjct 277 AACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTC 315 >seq224338 Length=298 Score = 219 bits (242), Expect = 1e-54 Identities = 155/178 (87%), Gaps = 6/178 (3%) Strand=Plus/Plus Query 387 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATG 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATG 60 Query 447 GTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGT 506 |||||||||||||||||||||||||||||||| |||| | || || | | | Sbjct 61 GTTATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCGCTC------CGAA 114 Query 507 GTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 | || || |||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 115 GAACTAACCGGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCATATACGTCG 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1697682939008