Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq74834 183 6e-44 seq192604 176 1e-41 seq110065 158 3e-36 seq220586 127 4e-27 >seq74834 Length=1907 Score = 183 bits (202), Expect = 6e-44 Identities = 207/279 (74%), Gaps = 15/279 (5%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| ||||| ||| |||||| || || | Sbjct 269 GGCTGCTGGCACGTAGTTAGCCGGTGCTTTTTCTGCAGGTACCGTCACTTTCGC------ 322 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || |||||| ||||||| |||||||| ||| || || |||||| |||||| Sbjct 323 --------TTCTTCCCTGCTAAAAGAGGTTTACAACCCGAAGG-CCGTCATCCCTCACGC 373 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| |||| || ||| |||||| |||||||||| |||||||||||||||||| Sbjct 374 GGCGTTGCTGCATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 433 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| | | |||||||| | ||| || | Sbjct 434 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCACCCTCTCAGGCCGGCTACCCGT 493 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 |||||||| |||| ||| ||||| | || || |||| || Sbjct 494 CGTAGGCTTGGTGAGCCATTACCTCACCAACAACCTGAT 532 >seq192604 Length=994 Score = 176 bits (194), Expect = 1e-41 Identities = 156/190 (82%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCT-CCCACACG 59 ||||||||||||||||||||||| |||||||| || |||| | | |||| | | |||| Sbjct 524 GGCTGCTGGCACGGAGTTAGCCGGAGCTTATTCGTACAGTACCTTC-AGCTACTCTCACG 582 Query 60 TG-GAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC 118 | | ||| ||||| || || |||||||||||||||||| ||||||| || |||||||| Sbjct 583 AGAGTAGG-TTTATCCCTGTACAAAAGAAGTTTACAATCCATAGAACCGTCGTCCTTCAC 641 Query 119 GCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 178 || ||||||| |||| | || |||||| ||||||||||||||||||||||||||| Sbjct 642 GCGGGATGGCTGGATCAGGCGCTAACCCATTGTCCAATATTCCTCACTGCTGCCTCCCGT 701 Query 179 AGGAGTTTGG 188 |||||| ||| Sbjct 702 AGGAGTCTGG 711 >seq110065 Length=950 Score = 158 bits (174), Expect = 3e-36 Identities = 211/295 (72%), Gaps = 15/295 (5%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| |||| |||| ||||| ||| |||||| ||| | | | Sbjct 549 GGCTGCTGGCACGTAGTTGGCCGGTGCTTCTTCTCCAGGTACCGTCAATCACTC------ 602 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || ||||| | ||||| |||||||| ||| || || |||||| |||||| Sbjct 603 --------TTCGTCCCTGGTGAAAGAGGTTTACAACCCGAAGG-CCGTCATCCCTCACGC 653 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| |||| || || |||||| ||||||||| |||||||||||||||||| Sbjct 654 GGCGTCGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 713 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| | | |||||||| | ||| || | Sbjct 714 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGT 773 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 ||| | || ||| |||| ||||||| || || | || || | ||| |||||| Sbjct 774 CGTCGCCTTGGTAGGCCATTACCCCACCAACAAGCTGATAGGCCGCGGGCCCATC 828 >seq220586 Length=203 Score = 127 bits (140), Expect = 4e-27 Identities = 107/130 (82%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 ||||| |||||||| ||| || || |||||| |||||| | | |||| |||| || | Sbjct 73 AAAGAGGTTTACAACCCGAAGG-CCGTCATCCCTCACGCGGCGTCGCTGCGTCAGGCTTT 131 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct 132 CGCCCATTGCGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 191 Query 202 TCCAATGTGG 211 ||| ||||| Sbjct 192 CCCAGTGTGG 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1065838536896