Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq268497 217 2e-54 seq22537 116 6e-24 seq11297 102 1e-19 seq305 78.8 2e-12 >seq268497 Length=229 Score = 217 bits (240), Expect = 2e-54 Identities = 156/177 (88%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 103 AAGTCAGAATCCATGCCAGAACGGGGTGATT-CTCTCCTGCACATCGTAGTCGGATACGA 161 ||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||| Sbjct 229 AAGTCAGAATCCATGCCAGAACGCGGCGATTTCTCTCC-GCACATCGTAGTCGGATACGA 171 Query 162 ATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGC 221 |||||||||||||| | |||||||||||| |||||||||| | | ||||||| || ||| Sbjct 170 ATAGGCTTCGGCCCTGTACCTTAGCAGGCTGGCAACGGGCATTCAGCGGAAGTGCTGGGT 111 Query 222 GCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | |||||||| |||||||||||||| ||||| ||| ||||||| ||||||||||| Sbjct 110 GTCTAGCTGGCGTATTGCAATTTCACCTTGCGCGGGGTTAAATCCCTTGCAGACGAC 54 >seq22537 Length=3125 Score = 116 bits (128), Expect = 6e-24 Identities = 101/123 (82%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | |||||||| |||||| ||||| || | || | Sbjct 2112 GTACGAGAGGAACCGTTCA-TTC-GCGTAATTGGTATTTGCGCCTGTCCGATAGGACAAT 2169 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| | Sbjct 2170 GGCGCGAAGCTACCACGCGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 2229 Query 121 GAA 123 ||| Sbjct 2230 GAA 2232 >seq11297 Length=3100 Score = 102 bits (112), Expect = 1e-19 Identities = 92/113 (81%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || ||| | |||||||| || || | |||| ||| |||||| Sbjct 3049 GTACGAGAGGAACTGTTGA-TTC-GTGTAATTGGTCTTGGCCGTTGTCCAACCGGGCAGT 2992 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || |||||||||||| ||| ||| ||||||||||||||||||| ||||||| Sbjct 2991 GCGGCGAAGCTACCACACGCTAGATAATGGCTGAACGCCTCTAAGCCAGAATC 2939 >seq305 Length=2271 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 749 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 806 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 807 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817001069312